Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0012 ATGGCCTTGCAGAACATTGGTGCTGGAAATAGTGATGATGCCTTCTATCGGTATAAGATGCCTAAAATGATTACCAAGATTGAGGGTAGAGGGAATGGCATCAAAACAAATATTGTCAACATGGTTGACATTGCCAAGGCATTGGCAAGGCCACCCTCTTACACAACCAAGTACTTTGGTTGCGAACTTGGGGCACAGTCTAAATTTGATGAGAAAGTTGGGACTTCTCATGTTAATGGGGCACATGACACTGCAAAACTTGCAGCTCTTCTTGAGATCTTTATCAAGAAATACGTCCAGTGTTATGGTTGTGGAAACCCTGAAACTGAGATATTGATTACTAAGAACCAAATGATCCAGCTGAAATGCGCTGCTTGTGGTTTTGTGTCAGATGTGGATATGAGAGACAAGCTGACTAGCTTTATTATTAAAAACCCTCCTGAAACAAAGAAAGGATCCAAAGACAAGAAGGCTATGAGGAGAGCCGAGAAGGAGAGACTGAAGGAAGGTGCAGCAGCTGACGAGGAACAAAAGAAAATGAAGAAAGAGACTAAGAAGAAAAGCTCGTCCACTTCCAAGGATGAGACCACAAAGTTGACCTCTACAAAGAAGAAAGCCAGTGGCTCTGATGAAGATCATCGATCTCCAGCTCACAGTCAAGTTGATGAGAAAGAAGAGGCTCCTGATGAAGATGATGATGATGGTGAAGTGCAGTGGCTAACAGATACGTCATTAGAGGCTGCTCAGCAGCGTATCCAAGAACAGCTAAGTGCCGTAACAGCTGATATGGTCATGCTCTCCACAGATGAGCCAGAGAAGAAGGAAAAAGCATCAAGTAAGACAAGTGATGGTTCTGAAAATGGTAATGCGATGCACTACAGGAAACTGGTTGGAGAAGTGAAAGCAATCTTGAACAAAGGTGTTGTGGCGAGTGAATTGCAGTCCCATATGGAAGCAATTCCAGCACCAGCTCAAGAAAAGATCAGTGCTCTGATTGAGGCCTTATTTGAGGGTATTGAGAAAGGGTTTGCAAAAGAAGTGGTCAAGAAGAAGCGCTACCTTGCTGCTGCAGTTTCCATGGAGGAGGGATCACATTTGCTATTGCTTCATGCAATTGAGGCTTTCTGTCTAAAGTCCACTTCCAATGCTTTGAAGGAAATTCCCATTGTTTTGAAGGCACTTTATGATTCTGATCTGTTGGAGGAAGAGCACATCGTGCAGTGGTATCAAGAAGGGCTGAATGGCGACAACAAGGACTCTCAGATATGGAAGAAGGCCAAACCTTTGATTGAATGGCTTCAAAGTGCGGAATCAGAAACAGAGGAAGAGTAA 1332 0.4362 MALQNIGAGNSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPPSYTTKYFGCELGAQSKFDEKVGTSHVNGAHDTAKLAALLEIFIKKYVQCYGCGNPETEILITKNQMIQLKCAACGFVSDVDMRDKLTSFIIKNPPETKKGSKDKKAMRRAEKERLKEGAAADEEQKKMKKETKKKSSSTSKDETTKLTSTKKKASGSDEDHRSPAHSQVDEKEEAPDEDDDDGEVQWLTDTSLEAAQQRIQEQLSAVTADMVMLSTDEPEKKEKASSKTSDGSENGNAMHYRKLVGEVKAILNKGVVASELQSHMEAIPAPAQEKISALIEALFEGIEKGFAKEVVKKKRYLAAAVSMEEGSHLLLLHAIEAFCLKSTSNALKEIPIVLKALYDSDLLEEEHIVQWYQEGLNGDNKDSQIWKKAKPLIEWLQSAESETEEE* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0012 443 CDD W2_eIF5 326 441 - -
Gso5g0012 443 Gene3D - 3 104 - -
Gso5g0012 443 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Gso5g0012 443 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Gso5g0012 443 ProSiteProfiles W2 domain profile. 286 443 IPR003307 GO:0005515
Gso5g0012 443 Gene3D - 289 434 - -
Gso5g0012 443 MobiDBLite consensus disorder prediction 148 224 - -
Gso5g0012 443 SUPERFAMILY ARM repeat 296 437 IPR016024 -
Gso5g0012 443 MobiDBLite consensus disorder prediction 143 236 - -
Gso5g0012 443 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 1 443 - -
Gso5g0012 443 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Gso5g0012 443 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Gso5g0012 443 MobiDBLite consensus disorder prediction 268 289 - -
Gso5g0012 443 SMART 542_3 351 439 IPR003307 GO:0005515
Gso5g0012 443 Pfam eIF4-gamma/eIF5/eIF2-epsilon 366 443 IPR003307 GO:0005515
Gso5g0012 443 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 443 IPR045196 GO:0003743|GO:0006413
Gso5g0012 443 Gene3D - 105 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0012 Gso-Chr5 97319 99700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0012 1 436 Eukaryotic Initiation Factors Gene Family AT1G77840 61.435 5.89e-177 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0012 K03262 - gmx:100796565 812.757