Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2133 ATGGATTCAGGTCCTCCGGCGAACGATTTGTGTTCAGTGTGCCATGGCAACTTTCATATTCCATGCCAAGCCAATTGTTCTCACTGGTTTTGCGGAAATTGCATAATGCTTGTGTGGCAGCACGGATCAGTGGGTTGTTCATGCAAGTGCCCACTGTGTCGTCGAGCCATCAGTCTCTTAGTCCCCACAGAAGAGTCTCTGAGGCAACAGCAGGACCCCGAAGTTTCCCAGATTCTGTCAAAGATTCATGCCTATAACCGTTTCTTCGGTGGCCAACCCACCACTCTCTATCAGAGACTGCGAGATCTTCCCTTTCTCTTGCACAGGCTGCTCAGGGAATTCCTCCACCCTCACAGATCCCTTCCTCTTCTCATTCGCGCTCGCGTCTTTGTTGTTATGATAGCGAGTGTTATATACCTCTTCAGCCCTATTGACATCATTCCTGAAGGAGTAGTTGGTTTCTTAGATGATCTCCTAATTGTGCTCATCTGCTTCCTACATGTTGCTGCCCTTTATAGATCAGTACTCTACCTCCGTCATGGGGGTTCCTGA 552 0.4873 MDSGPPANDLCSVCHGNFHIPCQANCSHWFCGNCIMLVWQHGSVGCSCKCPLCRRAISLLVPTEESLRQQQDPEVSQILSKIHAYNRFFGGQPTTLYQRLRDLPFLLHRLLREFLHPHRSLPLLIRARVFVVMIASVIYLFSPIDIIPEGVVGFLDDLLIVLICFLHVAALYRSVLYLRHGGS* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2133 183 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 96 IPR013083 -
Gso4g2133 183 Pfam Protein of unknown function (DUF1232) 131 162 IPR010652 -
Gso4g2133 183 SUPERFAMILY RING/U-box 9 61 - -
Gso4g2133 183 PANTHER BNAC07G13660D PROTEIN 6 183 - -
Gso4g2133 183 ProSiteProfiles Zinc finger RING-type profile. 11 54 IPR001841 -
Gso4g2133 183 PANTHER UNCHARACTERIZED 6 183 IPR038896 GO:0061630
Gso4g2133 183 ProSitePatterns Zinc finger RING-type signature. 26 35 IPR017907 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g2133 36 183 C3H Transcription Factor Family AT1G72175 64.901 5.09e-57 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2133 K15707 - gmx:100306204 360.147