Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2131 ATGAAAATGGACATATACGAGCCATTTCAGCAAGTTAGCATGTGGGGGGGCAACTTTAAAGTTGATGGCGGTCTGAATTCAATTGCTTCCCCAATGTTAATGGTTGGCACTAATGTGGAGAACAAGATGCTAAGACGCCTAGCTCAGAATCGAGAGGCTGCCCGGAAAAGTAGGCTGCGGAAAAAGGCTTATGTTAAACAATTAGAATCAAGCCGTTTGAAGCTCATGCAATTGGAGCTGGAAATTGGGAAAGCAAGAAAGCAGGGTCTATATATGGGCACTGCATTAGATGCCGGCTATATAGGATCAACATCAGAAACAATAAATCCAGGGATTGTTGCTTTTGAAATTGAATATGGGCAATGGGTTGAAGAGCAAGAAAGGCGGAATGAAGAACTTAGACATGCATTTCAAACACAAGCACCTGATGTACAGCTCAACGTAGTGGTTCAGAGTGTCTTAAATCATTACTCAAATCTTTTCAGAATGAAAGCAGAGGCTGTAAAGGCTGATGTCCTCTATTTACTCTCTGGTGCGTGGAAACCATCAGTGGAGCGAATTTTCCTTTGGATTGGAGGCTCCCGTCCATCGCAGCTTCTAAACATCATCGTGCCTCAACTTGAGCCTTTGACTGATCAACAAATTGTTAGTATTAACAACCTCCGCCTATCGTCTCAGCAAGCTGAAGATGCTCTTTCACAAGGATTGGAAAAACTTCAGCAGAGTTTGGTCCACGACATGGCAGTTGATCCATTGGGTGTAGGAAACTTGGGACTTCAGATGGCTCGTACTATGGAAAAATTTGAGGCACTAGAAGGTTTTGTAAACCAGGCAGATCACCTTAGGCAACAAACTCTGCTGCACATGTCACGCATCCTGTCAATTCACCAAGCTGCTCGCGGCTTGCTGGCTCTCGGGGAATACTTTCATCGTCTTCGTACCCTTTGCTCTCTCTGGTCTGCTCGTTCATGTGAACTTGCCTAG 984 0.4472 MKMDIYEPFQQVSMWGGNFKVDGGLNSIASPMLMVGTNVENKMLRRLAQNREAARKSRLRKKAYVKQLESSRLKLMQLELEIGKARKQGLYMGTALDAGYIGSTSETINPGIVAFEIEYGQWVEEQERRNEELRHAFQTQAPDVQLNVVVQSVLNHYSNLFRMKAEAVKADVLYLLSGAWKPSVERIFLWIGGSRPSQLLNIIVPQLEPLTDQQIVSINNLRLSSQQAEDALSQGLEKLQQSLVHDMAVDPLGVGNLGLQMARTMEKFEALEGFVNQADHLRQQTLLHMSRILSIHQAARGLLALGEYFHRLRTLCSLWSARSCELA* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2131 327 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 40 75 IPR004827 GO:0003700|GO:0006355
Gso4g2131 327 SUPERFAMILY Leucine zipper domain 42 75 IPR046347 GO:0003700|GO:0006355
Gso4g2131 327 Pfam Seed dormancy control 131 204 IPR025422 GO:0006351|GO:0043565
Gso4g2131 327 Gene3D - 41 91 - -
Gso4g2131 327 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 45 60 IPR004827 GO:0003700|GO:0006355
Gso4g2131 327 PANTHER FACTOR TGA7, PUTATIVE-RELATED 3 324 - -
Gso4g2131 327 ProSiteProfiles DOG1 domain profile. 112 322 IPR025422 GO:0006351|GO:0043565
Gso4g2131 327 PANTHER TRANSCRIPTION FACTOR TGA9 3 324 - -
Gso4g2131 327 Coils Coil 61 88 - -
Gso4g2131 327 SMART brlzneu 38 98 IPR004827 GO:0003700|GO:0006355
Gso4g2131 327 Pfam bZIP transcription factor 41 70 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2131 Gso-Chr4 51780917 51785787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g2131 3 325 Calmodulin-binding Proteins AT1G22070 53.425 4.62e-123 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso4g2131 DOG1 5.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2131 K14431 - gmx:100794268 613.994