Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2119 ATGCATTACCTATCTCGGATTTTTGAGCCCAGGAAACAAACCAAGACCATGGATCGCAAGAACCCGCGGAGGAAGCCCAAGCTCGAGCGCCGTAACGCTCTTAAATACTCCTCCTCCGAATACGACGTCGTATCCTCCCCCTCCGACGACACGCTCTACACGCGCTCCATGGAGTTCTACGACCGCACGAGCTTCCGAATCGAGGGCGTCGAGGGCGAGTTCGATCGAATTTGCCGCAGTTTGGGCCTCTCCGGCCCAGAGGACTTTGCTATTCCCGCTGCGGCGTGGGAGGCCATGAAGTTTCGCTCCTCTTCGGATATTCTCCCGAGACTGAAGCTCGATAACCTCGATATTCCCGAGGAAGACGTAGAAGAAGAATCGAAGGTTAACGAGGTGAGAATGTTCAAATCAGCAGAGGAAGGCGAATTGAGTGAAAATCACGGAGTTAGTGATAGTGTTAGGGTCAGGGAGATAGATGAATCGAGCAATGGCATTAAGGGGATTCGGCCACCGATGCTGAAGCCTCCGCCGGGAACGAGGGTTCAGGTGGTGGATGATAGCGCGTGTTCCTCGTGGGACCTCTTGAGGGACTTGGCTCCTCAAGGGGGAGAAGGGTTACCGTTGAACCATTCCATTGAAGAGAGGGAAGTGGCGGAGAAGGAAGAAGGGGAAGTTGGTACTAAAGAGAGTCCGAAGAGAGAAGAGGAACAGAATGTGGATAATGCGGCGAGGATTGCGGAGATTGTGGCGGGGCTTTCGGAGTCGTGTTCGTTTTCTACTTCGAACGAAGACGATTCTTCGAGTAGTACCACGGACCCTAGGTCTAATAATATTTCTCCGCAAGGGAGAATCAAACGGATTATTACCGCCGGAAGCTGGCAGAAGGGTGAGTTTCTCGGGGGTGGCTCCTTTGGCTCCGTTTATGAAGGAATTTCTGATGATGGATTCTTTTTCGCTGTAAAAGAAGTTTCACTGCTTGATCAAGGGACTCAGGGAAAACAAAGTGTATATCAATTGGAGCAGGAAATAGCACTTTTGAGTCAGTTTGAGCATGACAATATTGTTCAATACTATGGCACAGAAATGGATCAATCAAAGTTGTATATCTTTCTTGAGCTTGTAACGAAAGGTTCCCTTAGAAGCCTCTATCAGAAGTATACTCTTCGAGATTCCCAAGTATCTGCCTATACGAGACAGATTCTGCATGGTTTGAAGTATCTTCATGATCGAAATGTGGTTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAGTGGATCTGTCAAGCTTGCAGATTTTGGATTGGCAAAGGCAACCAAATTGAATGACGTTAAATCAATGAAGGGCACAGCATTCTGGATGGCGCCTGAGGTTGTAAAAGGAAAGAACAAGGGTTATGGGCTTCCAGCTGATATGTGGAGTCTGGGATGCACTGTACTGGAGATGTTAACAGGCCAACTTCCGTACCGTGATTTAGAATGTATGCAGGCATTATTTAGAATTGGAAAAGGTGAGCGACCTCCTATTCCTGACTCTCTTTCGAGAGATGCACAAGATTTTATCCTGCAGTGCCTTCAAGTTAATCCAAATGATCGTCCCACTGCTGCTCAACTTTTAAACCATTCATTTGTCCAAAGGCCACTTTCTCAGTCCTCTGGTTCTTCATTTCCTCATATTCACGGCCGTAAGGGTTAA 1701 0.4762 MHYLSRIFEPRKQTKTMDRKNPRRKPKLERRNALKYSSSEYDVVSSPSDDTLYTRSMEFYDRTSFRIEGVEGEFDRICRSLGLSGPEDFAIPAAAWEAMKFRSSSDILPRLKLDNLDIPEEDVEEESKVNEVRMFKSAEEGELSENHGVSDSVRVREIDESSNGIKGIRPPMLKPPPGTRVQVVDDSACSSWDLLRDLAPQGGEGLPLNHSIEEREVAEKEEGEVGTKESPKREEEQNVDNAARIAEIVAGLSESCSFSTSNEDDSSSSTTDPRSNNISPQGRIKRIITAGSWQKGEFLGGGSFGSVYEGISDDGFFFAVKEVSLLDQGTQGKQSVYQLEQEIALLSQFEHDNIVQYYGTEMDQSKLYIFLELVTKGSLRSLYQKYTLRDSQVSAYTRQILHGLKYLHDRNVVHRDIKCANILVDASGSVKLADFGLAKATKLNDVKSMKGTAFWMAPEVVKGKNKGYGLPADMWSLGCTVLEMLTGQLPYRDLECMQALFRIGKGERPPIPDSLSRDAQDFILQCLQVNPNDRPTAAQLLNHSFVQRPLSQSSGSSFPHIHGRKG* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2119 566 MobiDBLite consensus disorder prediction 209 240 - -
Gso4g2119 566 Pfam Protein kinase domain 294 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g2119 566 SUPERFAMILY Protein kinase-like (PK-like) 273 550 IPR011009 -
Gso4g2119 566 SMART serkin_6 293 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g2119 566 ProSitePatterns Protein kinases ATP-binding region signature. 299 321 IPR017441 GO:0005524
Gso4g2119 566 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 60 559 - -
Gso4g2119 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Gso4g2119 566 MobiDBLite consensus disorder prediction 255 281 - -
Gso4g2119 566 MobiDBLite consensus disorder prediction 1 31 - -
Gso4g2119 566 ProSiteProfiles Protein kinase domain profile. 293 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g2119 566 Gene3D Transferase(Phosphotransferase) domain 1 291 561 - -
Gso4g2119 566 MobiDBLite consensus disorder prediction 1 16 - -
Gso4g2119 566 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 60 559 - -
Gso4g2119 566 MobiDBLite consensus disorder prediction 163 182 - -
Gso4g2119 566 MobiDBLite consensus disorder prediction 201 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2119 Gso-Chr4 51664629 51672032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g2119 27 550 MAP Kinase Kinase Kinase AT4G08500 51.027 1.62e-168 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gso4g2119 Pkinase 6.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2119 K13414 - gmx:100819999 1077.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2119 4 51664629 51672032 Gso4g2119 4 51664629 51672032 ECH