Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2116 ATGCGCCAAGCACTCCTGCTACGTGACGACACAGAAAGAGACACCTACGGTTGGAGCCGCAGAGTTAGCCCCAGCATAGAAGTTGCAGAGTTGGCCAACGGTGACGTGTACATGGGAAGCTTCTCCGGGAACGCGCCTAGTGGATCGGGGAAGTACCTGTGGAGAGACGGGTGCATGTACGAGGGAGACTGGAAGAAAGGGAAGGCCTGTGGGAAAGGCAAATTCTCCTGGCCTTCGGGCGCCACCTACCAGGGACAATTTAAATCGGGTCGCATGGACGGCTTTGGAACCTTCACCGGATCCGACGGTGACACCTACCGCGGCTCTTGGAGCTCCGACCGGAAGCACGGCTACGGCCAGAAGCGTTACGCCAACGGGGACTTGTACGAGGGGTCCTGGAAGCGGAACGTGCAGGAGGGGGAGGGGCGCTACGTGTGGAAGAACGGGAACGAGTATTACGGGGAGTGGAAGAACGGCGTCATTTTCGGCCGTGGTACGCTCATTTGGGCCAACGGGAACCGTTACGATGGCCAATGGGAGAACGGCGTTCCCAAGGGGCAAGGGGTTTTCACCTGGCCCGATGGGAGCTGCTATGTTGGGTGCTGGAACAAGGACCTTAAGGTGAACCAGCTTAATGGAACTTTTTACCCCGGGAGCGGTGATACTCTCACCGTCACAATGAGGAAGCGTTCTTCCGTTGACGGTGCTAGAGGGAGCGCTGTTAAAAGTTTTCCCAGGATTTGTATCTGGGAATCGGAGGGTGAAGCCGGGGATATAACCTGTGATATAATCGATGAGGTGTCGTTGTTGTATCGGGATTCGAGTGGAACCGGTTCAGATCGGGGAGATGTTAAGCCGTTTCGCCGGAACCCTTGTCTTTCCGGTGAGGTGAAGAGACTGGGTCAGACTATATCCAAGGGGCATAAAAATTATGATCTCATGCTTAATCTGCAATTGGGTATAAGGTACTCTGTTGGGAAGGAAGCTTCCATTTCGCGAGAGCTTAAACCGAGTGATTTTGATCCGAAGGAGAAGTTCTGGACAAGGTTTCCCGCTGAAGGATCTAAGATTACGCCGCCGCATCAATCGGTGGTGTTCCGCTGGAAGGACTACTGCCCTATGGTTTTTAGACAATTGAGGAAGCTATTTCAGGTGGATCCTGCGGATTACATGTTAGCTATATGTGGGAATGATGCCCTTAGGGAGCTTTCCTCTCCTGGGAAAAGTGGAAGCTTCTTCTACTTGACCCAGGACGGCAGATTTATGATCAAGACGGTGAAGAAATCCGAAGTCAAGGTGCTTCTTCGGATGCTTCGAAGCTATTACCAACATGTTTCTAAATATGAGAATTCTCTTGTGACAAAATTCTATGGAGTACATTGTGTCAAACCAATTGGAGGCCAAAAGACTCGCTTTATTGTGATGGGCAATCTTTTCTGCTCAGAATATCCAATCCATAGACGATTTGACTTGAAGGGATCTTCACATGGCCGTACAACAGATAAGACCAAGGAGATTGATGAAAGTACCACCCTCAAGGACCTGGATCTCAACTTTGTGTTTCGTCTACAAAATAATTGGTTCCAGGATTTCATCAAACAAATTGAGAGGGATTGTGAGTTCTTGGAAGCTGAGGGAATTATGGATTATAGTCTTTTAGTTGGCCTTCATTTTCGTGATGATAATACATATGAAAAAATGGGATTGTCACCGTTTCTTTTGCGCACAGGAAAGTGGGATTCTTATCAGAGTGAAAAGTTCATGCGTGGTTATCGCTTTCTTGAAGCAGAGCTGCAGGATAGAGATCGAGTTAAATCTGGCCGGAAATCATTGATTAGGTTAGGAGCCAATATGCCTGCGAGAGCAGAGCGCATGGCTCGGAGGAGTGATTTTGATCAATACACCCCTTGTTGCAGTGGGGAAACCTACGATGTTGTTATATATTGTGGGATTATTGACATTTTGCAAGATTACGATATCAGCAAGAAACTGGAGCATGCTTACAAGTCTTTACAGGTTGACCCTTCATCAATCTCAGCTGTTGATCCAAAGCTTTACTCAAAAAGGTTCCGGGATTTTGTGGGTAGAATATTCATTGAAGACTGGTAA 2109 0.4841 MRQALLLRDDTERDTYGWSRRVSPSIEVAELANGDVYMGSFSGNAPSGSGKYLWRDGCMYEGDWKKGKACGKGKFSWPSGATYQGQFKSGRMDGFGTFTGSDGDTYRGSWSSDRKHGYGQKRYANGDLYEGSWKRNVQEGEGRYVWKNGNEYYGEWKNGVIFGRGTLIWANGNRYDGQWENGVPKGQGVFTWPDGSCYVGCWNKDLKVNQLNGTFYPGSGDTLTVTMRKRSSVDGARGSAVKSFPRICIWESEGEAGDITCDIIDEVSLLYRDSSGTGSDRGDVKPFRRNPCLSGEVKRLGQTISKGHKNYDLMLNLQLGIRYSVGKEASISRELKPSDFDPKEKFWTRFPAEGSKITPPHQSVVFRWKDYCPMVFRQLRKLFQVDPADYMLAICGNDALRELSSPGKSGSFFYLTQDGRFMIKTVKKSEVKVLLRMLRSYYQHVSKYENSLVTKFYGVHCVKPIGGQKTRFIVMGNLFCSEYPIHRRFDLKGSSHGRTTDKTKEIDESTTLKDLDLNFVFRLQNNWFQDFIKQIERDCEFLEAEGIMDYSLLVGLHFRDDNTYEKMGLSPFLLRTGKWDSYQSEKFMRGYRFLEAELQDRDRVKSGRKSLIRLGANMPARAERMARRSDFDQYTPCCSGETYDVVIYCGIIDILQDYDISKKLEHAYKSLQVDPSSISAVDPKLYSKRFRDFVGRIFIEDW* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2116 702 SUPERFAMILY SAICAR synthase-like 306 698 - -
Gso4g2116 702 SMART morn 150 171 IPR003409 -
Gso4g2116 702 SMART morn 173 194 IPR003409 -
Gso4g2116 702 SMART morn 127 148 IPR003409 -
Gso4g2116 702 SMART morn 81 102 IPR003409 -
Gso4g2116 702 SMART morn 58 79 IPR003409 -
Gso4g2116 702 SMART morn 35 56 IPR003409 -
Gso4g2116 702 SMART morn 104 125 IPR003409 -
Gso4g2116 702 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 14 701 - -
Gso4g2116 702 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 296 477 IPR027484 -
Gso4g2116 702 SMART PIPK_2 336 699 IPR002498 GO:0016307|GO:0046488
Gso4g2116 702 Gene3D - 478 698 - -
Gso4g2116 702 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 395 696 IPR002498 GO:0016307|GO:0046488
Gso4g2116 702 Gene3D - 62 111 - -
Gso4g2116 702 Gene3D - 159 216 - -
Gso4g2116 702 Gene3D - 112 158 - -
Gso4g2116 702 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 305 698 IPR002498 GO:0016307|GO:0046488
Gso4g2116 702 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 33 159 - -
Gso4g2116 702 PIRSF PIP5K_plant 218 702 IPR017163 GO:0005524|GO:0016308
Gso4g2116 702 PIRSF PIP5K_plant 9 225 IPR017163 GO:0005524|GO:0016308
Gso4g2116 702 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 14 701 IPR023610 -
Gso4g2116 702 Pfam MORN repeat 129 150 IPR003409 -
Gso4g2116 702 Pfam MORN repeat 83 105 IPR003409 -
Gso4g2116 702 Pfam MORN repeat 37 59 IPR003409 -
Gso4g2116 702 Pfam MORN repeat 152 174 IPR003409 -
Gso4g2116 702 Pfam MORN repeat 106 127 IPR003409 -
Gso4g2116 702 Pfam MORN repeat 175 196 IPR003409 -
Gso4g2116 702 Pfam MORN repeat 60 81 IPR003409 -
Gso4g2116 702 CDD PIPKc_AtPIP5K_like 310 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2116 Gso-Chr4 51634281 51638794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g2116 17 701 Acyl Lipid Metabolism Gene Families AT1G21980 74.392 0.0 1059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2116 4 51634281 51638794 Gso4g2116 4 51634281 51638794 ECH
Gso4g2116 4 51634281 51638794 Gso6g0925 6 8881790 8886061 GST
Gso4g2116 4 51634281 51638794 Gso14g1206 14 28327665 28329746 PCT
Gso4g2116 4 51634281 51638794 Gso13g0153 13 10093968 10095776 PCT