Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2104 ATGGAAATAGACATGGACATGGACTTCTCCGGTTACAGCACAATCACCAACACAATCCCCTCTTCTGATGATGACTATGGTTGCAACTGGAACCATTGGTCCCCCGTCGTCAACTGGGACGCCTTCACCGGCGCCCACGACGACTTCCACCACCTCATCGACTCCATCATGTGCGACAGCGCCGCCGCGGAGGAGGACAACCTCAGCCCCGACGATCACGCCGCCAGCAACTCCCCCTCCGCCTCCGTCACGGAGGAGGAGGAGGACGACGCCGACGAAGAAACCGGCCCCGTCGACGATTCCAAGGGCCTGAGAGTCGTCCATCTCCTGATGGCCGCCGCGGAGGCCCTCACTGGTGCTCCCAAGAGCCGCGACCTGGCTCGAGTGATATTGGTTCGGCTCAAGGAGTTGGTCTCCCACGCAGCGCCACCGCACGGCTCCAACATGGAGAGGCTCGCCGCCTACTTCACCGACGCCCTCCAGGGCCTGCTAGAGGGCGCCAGCGGGGGTGCGCACAACAACAAACGTCACCACCACTACAACATCATCACGTCGTCATGTGGGCCCCACCACCGCGACGATCATCATAATCACCAAAGCAACACCCTCGCGGCGTTCCAACTGCTCCAGGACATGTCACCCTACGTCAAGTTCGGGCACTTCACGGCCAACCAGGCCATCCTGGAGTCCGTGGCCCACGAGCGCCGTGTCCACATCGTCGATTACGACATCATGGAAGGGGTCCAGTGGGCCTCCCTCATGCAGGCCCTCGCCTCCAACAAAACGGGCCCACCGGGCCCACACCTTCGTATAACCGCATTGTCCCGCACGGGCTCCGGACGCCGCTCCATCGCCACCGTCCAAGAAACAGGGCGGCGCTTGACGGCGTTCGCAGCCTCCCTTGGTCAACCGTTCTCCTTCCACCATTGCAGGTTGGACCCCGACGAAACTTTTAAACCTTCGTCGCTTAAGCTGGTTCGCGGAGAGGCTTTGGTTTTTAACTGCATGCTGAACTTACCGCACCTTAGTTACCGCGCGCCGGATTCGGTAGCGTCGTTTTTGAGCGGAGCCAAAGCGTTGAAGCCGAGGCTGGTGACTTTGGTGGAGGAGGAGGTGGGGTCCAGTGCTGGAGGGTTCGTGGGGCGGTTTATGGAGTCGCTGCATCACTATTCAGCGGTCTTTGACTCGCTGGAGGCTGGGTTTCCGATGCAGGGGCGGGCCAGGGCGCTTGTGGAGCGGGTTTTCTTCGGCCCAAGGATAGTGGGGTCGCTGGGCCGCTTATACCGGACGGGGGAGGAGGAGAGAGGGTCGTGGGGGGAATGGTTGGGTGCGGCGGGCTTCAGGGGAGTTCCGATGAGCTTCGCCAATCATTGCCAAGCCAAGCTGTTAATTGGTCTTTTCAACGACGGCTATAGGGTAGAGGAGTTGGGGACCAACAAGTTGGTCTTGGATTGGAAATCTAGGCGCTTGCTTTCTGCCTCCCTTTGGACTCAGATTAATTCATTTTAA 1509 0.6004 MEIDMDMDFSGYSTITNTIPSSDDDYGCNWNHWSPVVNWDAFTGAHDDFHHLIDSIMCDSAAAEEDNLSPDDHAASNSPSASVTEEEEDDADEETGPVDDSKGLRVVHLLMAAAEALTGAPKSRDLARVILVRLKELVSHAAPPHGSNMERLAAYFTDALQGLLEGASGGAHNNKRHHHYNIITSSCGPHHRDDHHNHQSNTLAAFQLLQDMSPYVKFGHFTANQAILESVAHERRVHIVDYDIMEGVQWASLMQALASNKTGPPGPHLRITALSRTGSGRRSIATVQETGRRLTAFAASLGQPFSFHHCRLDPDETFKPSSLKLVRGEALVFNCMLNLPHLSYRAPDSVASFLSGAKALKPRLVTLVEEEVGSSAGGFVGRFMESLHHYSAVFDSLEAGFPMQGRARALVERVFFGPRIVGSLGRLYRTGEEERGSWGEWLGAAGFRGVPMSFANHCQAKLLIGLFNDGYRVEELGTNKLVLDWKSRRLLSASLWTQINSF* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2104 502 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 14 497 IPR005202 -
Gso4g2104 502 ProSiteProfiles GRAS family profile. 97 497 IPR005202 -
Gso4g2104 502 MobiDBLite consensus disorder prediction 64 100 - -
Gso4g2104 502 PANTHER SCARECROW-LIKE PROTEIN 26 14 497 IPR030028 -
Gso4g2104 502 Pfam GRAS domain family 107 497 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2104 Gso-Chr4 51518414 51520316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g2104 138 497 GRAS Transcription Factor Family AT3G54220 37.808 5.42e-58 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso4g2104 GRAS 4.8e-98 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2104 - - gmx:100787926 1019.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2104 4 51518414 51520316 Gso4g2104 4 51518414 51520316 ECH
Gso4g2104 4 51518414 51520316 Gso6g0937 6 9008797 9010622 GST