Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2096 ATGAAAGAAACATGTTGTTGTGCTAGTTTTAGTTTTGGCAAGGCAAAGCCTTATTTGTTAACGGTGGGACTTCAATTTGGGTTCGCCGGTGCATACATCTTCTCCGTCGCTAGTCTCAACCATGGAATGAATCGTTACGTCTTCGTTGTCTATCGCAATGCCATCGCTGCATTGGCCCTTGCTCCTTTTGCATTGATTTTCGAGAGGAAAATTAGGCCAAAGATAACACTCCCTGTCTTCTTACAGATAGTGGCACTGGGATTTGTGGAGCCAGTGATTGACCAAGGGTTCACTTTCTTGGGCATGCAATATACATCGGCTTCATTTGCCTCTGCCATAATGAATGCCGTGCCTTCTGTCACTTTTGTGCTAGCCGTAATTCTAAGGTTAGAGCGTGTGAATGTAAAAGAGGTGCGGAGCCTAGCAAAGGTGATTGGGACGTTGGTAACTTTTTCAGGTGCTTTGTTAATGACACTTTACAAAGGTCCTCAAATTAAGCTATTTTTCTCTCCTGACACAACCCACCACCAAGATGGAAGCCACTCCCCTCAGGTTATCAAACACTGGCTCTCAGGGACTCTCTTTCTCCTCCTCGGTTGTGTTGCTTGGTCATCTTTCTTCATTTTACAGTCGATAACATTGAAAAGGTATCCGGCGGAATTGTCACTATCTTCATTGGTATGCTTATCGGGTGCTTTGCAAGCCAGCGTGGTGGCAATAGTAGCGACTCGTCATTCTGGGCTTGTGGCATGGGCCTTAGGTTGGGACTTCAGGCTCTATGGCCCTCTCTACACGGGAATAGTTACCTCTGGAATTACATATTATGCCCAAGGATTGATATTGCAAACCAGAGGCCCAGTATTTTTAACTGCCTTCAATCCCCTTTGCATGGTCATAACTTCTGCTTTAGGCTCCTTCCTTTTTGCAGAGCAGCTTCATCTGGGAAGTATCATTGGAGCTGTCATTATCGCATTGGGTCTGTACTCTGTGGTATGGGGCAAAGGCAAAGACTATTCAAACCCAACGCCGTCATCACCTACAACAAAGCACACAGAGACACCACAGCTTCCAATTACCTCATCTGATATCTAA 1092 0.4551 MKETCCCASFSFGKAKPYLLTVGLQFGFAGAYIFSVASLNHGMNRYVFVVYRNAIAALALAPFALIFERKIRPKITLPVFLQIVALGFVEPVIDQGFTFLGMQYTSASFASAIMNAVPSVTFVLAVILRLERVNVKEVRSLAKVIGTLVTFSGALLMTLYKGPQIKLFFSPDTTHHQDGSHSPQVIKHWLSGTLFLLLGCVAWSSFFILQSITLKRYPAELSLSSLVCLSGALQASVVAIVATRHSGLVAWALGWDFRLYGPLYTGIVTSGITYYAQGLILQTRGPVFLTAFNPLCMVITSALGSFLFAEQLHLGSIIGAVIIALGLYSVVWGKGKDYSNPTPSSPTTKHTETPQLPITSSDI* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2096 363 Pfam EamA-like transporter family 191 331 IPR000620 GO:0016020|GO:0016021
Gso4g2096 363 Pfam EamA-like transporter family 17 158 IPR000620 GO:0016020|GO:0016021
Gso4g2096 363 PANTHER WAT1-RELATED PROTEIN 11 357 - -
Gso4g2096 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 335 - -
Gso4g2096 363 MobiDBLite consensus disorder prediction 340 363 - -
Gso4g2096 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Gso4g2096 363 PANTHER WAT1-RELATED PROTEIN 11 357 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2096 Gso-Chr4 51404719 51410025 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g2096 11 360 Nodulin-like Gene Family AT1G44800 48.571 5.98e-121 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2096 - - gmx:100812537 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2096 4 51404719 51410025 Gso4g2096 4 51404719 51410025 ECH
Gso4g2096 4 51404719 51410025 Gso6g0944 6 9084576 9089537 GST