Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2092 ATGGAGGACCAAAATGGTAGTGGTAAGTTGAGCCAAGGGCTTCGCAAAGTGAAGCCTTACCTTGCTATATTGTCCCTTCAATTTGGCTACTCAGGGATGTATATCATCACTATGGTTTCCTTCAAGCATGGAATGAGTCATTGGATACTCTCAGTGTATCGTCATGTAGTTGCCGCTATTATAATAGTCCCTTTTGCACTTGTCCTTGAAAGAAAAATAAGACCAAAGATGACTCTTCCCATCTTCCTGAGGATAGTGGCACTTGGTTTCCTTGAGCCAGTGCTAGATCAGAACTTGTACAACATGGGGATGAAAATGACCTCAACAACGTTTGCATCCGCCACTGTTAATGTCCTCCCGGCCATTACTTTTGTAATGGCACTCGTTTTCAGGCTAGAGAAGGTGAACTTGAGAAAATTTCACAGTGTAGCCAAGGTCATTGGAACCGTTATAACAGTTTCAGGAGCTATGGTTATGACTCTGTACAAAGGCCCTGCCTTCCAAATCATAAAGGGTGGAGGAGCCATGAGCCACCATAGCAACTCTAGCAGTACCAGTACCACCGAACCCTCTGACCAGCACTGGATAGTTGGAACTGTTTATCTCATATCAAGTTGTGCTAGTTGGGCTGGCTTCTTCATTTTGCAATCATTCACTTTGAAGAAGTACCCAGCAGAGCTCTCACTGACAGCTTGGATATGCGTGATGGGTATTATTGAGGGTTCAATCGCATCCTTTATATTTGAACGAGACTTTAGTGTATGGGCTATAGGCTGGGACTCAAGACTTCTTGCTTGTGTTTACTCTGGGGTGATATGTTCTGGAATGGCGTATTATGTACAAGGGGTTGTAACCAGGGAACGTGGACCAGTGTTTGTGACTTCTTTCAGCCCTCTATGTATGATTATCACCGCTGCATTGGGTTCCCTTGTCTTAGCCGAGCAAGTTCATCTAGGAAGTATATTTGGGGCAATTCTCATTGTGTGCGGACTTTACACTGTGGTGTGGGGCAAAAGCAAAGACCGTAAGAGCACAAGAGAAATAGAGAAAGGTGAAAGCCGAGAATTGCCAATAAAGGACGGTACAAAATCAGCGTCAGACATTTATGAAGGCATTGAGATCAATGTTCCTGCTGAGGTGTTGAAGAAAGGAGAAGGGAAAAATGTCCCACCAACAACATCATGA 1185 0.4422 MEDQNGSGKLSQGLRKVKPYLAILSLQFGYSGMYIITMVSFKHGMSHWILSVYRHVVAAIIIVPFALVLERKIRPKMTLPIFLRIVALGFLEPVLDQNLYNMGMKMTSTTFASATVNVLPAITFVMALVFRLEKVNLRKFHSVAKVIGTVITVSGAMVMTLYKGPAFQIIKGGGAMSHHSNSSSTSTTEPSDQHWIVGTVYLISSCASWAGFFILQSFTLKKYPAELSLTAWICVMGIIEGSIASFIFERDFSVWAIGWDSRLLACVYSGVICSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSLVLAEQVHLGSIFGAILIVCGLYTVVWGKSKDRKSTREIEKGESRELPIKDGTKSASDIYEGIEINVPAEVLKKGEGKNVPPTTS* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2092 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 160 - -
Gso4g2092 394 Pfam EamA-like transporter family 198 335 IPR000620 GO:0016020|GO:0016021
Gso4g2092 394 Pfam EamA-like transporter family 29 152 IPR000620 GO:0016020|GO:0016021
Gso4g2092 394 PANTHER WAT1-RELATED PROTEIN 13 367 IPR030184 GO:0016021|GO:0022857
Gso4g2092 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 259 340 - -
Gso4g2092 394 PANTHER WAT1-RELATED PROTEIN 13 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2092 Gso-Chr4 51349035 51353430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g2092 14 375 Nodulin-like Gene Family AT4G08300 65.217 2.20e-172 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2092 - - gmx:100811114 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2092 4 51349035 51353430 Gso4g2092 4 51349035 51353430 ECH
Gso4g2092 4 51349035 51353430 Gso6g0950 6 9152250 9156272 GST