Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2074 ATGTCGGGTGAGGAGACACAGAGGAATGTGTTTGGCGCGGAAACGGCGTCGTCCTTGGTGAAGGAGCTGAGGGACAACTTCGGTAAAGGAACCACGCGAAGTTACGAATGGAGAGTGTCGCAAGTGAAGGCTCTATTGAAGGCGGTGGTTGAAAACGAGGACCAGATCGTCGGTGCTCTTTGTTCCGACCTAGCCAAGCCTCCGCTCGAAACCGTCGTCTACGAGATTGGTATGTTTAAAAACTCATGTGAAGTCATACTGAAGGAATTGAAACATTGGATGACGCCAGAAAAGGTTAAAACGTCAATCAGAACTTTTCCTTCTTCAGCTGAAATAGTACCTGAACCGCTGGGTGTCGTGTTAGTCATCTCTGCATGGAACTATCCAATCTTGTTGTCCCTTGATCCAGTAGTTGGAGCTATAGCAGCTGGTAATGCTGTGGTTCTAAAGCCATCAGAAATTGCTCCGGCCACTTCATCAGTACTAGCAAAGTTGATAGAGAAGTATATGGATAACTCATTTGTAAGAGTTGTTGAGGGGGCAGTTGATGAAACAACTGCACTATTGCAGCAAAAGTGGAACAAGATTTTCTACACAGGTAATGGAAGAGTGGGAAAAATAGTGATGACTGCGGCTGCAAAACACCTTACACCAGTTGTACTGGAGCTTGGAGGAAAATCTCCTGTTGTTGTTGATTCAAACAACAATTTGCTGGTAGCAGCTAGACGAATAATTGCTGGCAAGTGGGGATTGAACAATGGACAAGCCTGCATTTCTCCCGATTATGTTATAACAACAAAAGACTATGCTCCCAAGTTGGTGGATACCCTAAAGACTGAATTGGAGTCATTTTATGGAAGGAACCCGTTGGAATCTGAAGATTTGTCTCGAATTGTGAGTTCCAACCACTTTGCTCGCTTGTCAAAGCTCTTGAATGATGATAAGGTTTCTGGCAAGATTGTTTATGGAGGCGAAAAGGATGAAAAGAAATTAAGGATTGCTCCCACTATTTTATTGGATGTTCCGCAAGATTCTTCGATAATGGGTGAGGAGATATTTGGTCCATTGCTTCCCATCATCACGGTCAATAAGCTCGAAGAAAGTATAGATGTGATCAACTCAGGAGCAAAGCCCCTCGCTGCATATGTATTTACAACCGACAACAAGTTCAAGGAGCAGTTCGTAAAGAATGTTTCTGCCGGGGGTTTGCTCGTCAATGACACTGCCTTACATCTTGTGGTTGATACCTTGCCATTTGGGGGAGTTGGGGAGAGTGGAATGGGTGCATACCATGGGAAGTTCTCTTTTGATGCTTTTACACACAAAAAAGCAGTTCTTTATCGCAGTTTTGCTGGGGATTCAGCAATAAGGTACCCACCATACACGGATACAAAACTGAGATTGATGAAGGCTCTCGTCGGTGGTCGTATCCTCGGAATAATTCGTGCTCTTTTCGGATGGTCCTAA 1467 0.4444 MSGEETQRNVFGAETASSLVKELRDNFGKGTTRSYEWRVSQVKALLKAVVENEDQIVGALCSDLAKPPLETVVYEIGMFKNSCEVILKELKHWMTPEKVKTSIRTFPSSAEIVPEPLGVVLVISAWNYPILLSLDPVVGAIAAGNAVVLKPSEIAPATSSVLAKLIEKYMDNSFVRVVEGAVDETTALLQQKWNKIFYTGNGRVGKIVMTAAAKHLTPVVLELGGKSPVVVDSNNNLLVAARRIIAGKWGLNNGQACISPDYVITTKDYAPKLVDTLKTELESFYGRNPLESEDLSRIVSSNHFARLSKLLNDDKVSGKIVYGGEKDEKKLRIAPTILLDVPQDSSIMGEEIFGPLLPIITVNKLEESIDVINSGAKPLAAYVFTTDNKFKEQFVKNVSAGGLLVNDTALHLVVDTLPFGGVGESGMGAYHGKFSFDAFTHKKAVLYRSFAGDSAIRYPPYTDTKLRLMKALVGGRILGIIRALFGWS* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2074 488 Pfam Aldehyde dehydrogenase family 13 445 IPR015590 GO:0016491
Gso4g2074 488 PANTHER ALDEHYDE DEHYDROGENASE 4 488 - -
Gso4g2074 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 225 425 IPR016163 GO:0016620
Gso4g2074 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 443 IPR016162 GO:0016491
Gso4g2074 488 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 221 228 IPR029510 GO:0016491
Gso4g2074 488 SUPERFAMILY ALDH-like 19 459 IPR016161 GO:0016491
Gso4g2074 488 PANTHER ALDEHYDE DEHYDROGENASE 4 488 IPR012394 GO:0006081
Gso4g2074 488 PIRSF ALDH 3 483 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2074 Gso-Chr4 51188659 51194508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g2074 76 486 Aldehyde Dehydrogenase Gene Family AT1G44170 71.046 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2074 K00128 - gmx:100803104 952.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2074 4 51188659 51194508 Gso6g0971 6 9343186 9347108 GST