Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2073 ATGGCAGAGCGTGTGTCATTGCCTTTACCATCTCAGTCTCAACTCTCTCCAACAACCACAATGGCTCTCTTGGGCGCCGCCTCCTCCTCCGCTCGCATCATTCCCTCCGTCTCACTCTCTTCCTCTTCTCGCTCCTTCTTCTCACTCTCATCCTCTTCTTCCAAACTCCAATGCTTGCGCTCCTCTCCTCGTATTTCGCACCTCTTTCTCAATCAGCGAAGAGCGGAGGTTCGCGTTTCGAGTGGAGGATACGGAACTGTGTCGGCACCGAAGTCAGTTGCGTCTGATCCTGATCAGTTGAAGAGCGCCAGAGAAGATATCAAGGAGCTTCTCAACTCCAAGTTCTGCCATCCTATTCTCATTCGTTTGGGATGGCATGATGCTGGTACTTATAATAAGAATATTGAGGAGTGGCCACAGAGAGGTGGAGCTAATGGTAGCTTAAGATTTGAAATTGAGCTGAAACATGGAGCCAATGCTGGACTTGTAAATGCATTGAAACTTCTTCAGCCGATCAAAGACAAATATTCTGGTGTGACATATGCAGACTTATTTCAGTTGGCTGGTGCTACAGCTGTGGAGGAAGCTGGAGGCCCAAAAATCCCTATGAAATATGGAAGAGTGGATGTATCTGGACCTGAACAATGCCCTGAAGAAGGGAGACTTCCAGATGCTGGTCCCCCTTCACCTGCTGATCATTTGCGTCAAGTTTTCTACCATATGGGTTTGAATGACAAGGAAATTGTTGCGTTATCTGGTGCACACACATTGGGGCGGTCTAGACCAGATCGCAGTGGTTGGGGAAAGCCTGAAACTAAATATACGAAAGATGGACCAGGAGCACCCGGAGGACAATCCTGGACAGTGCAATGGTTGAAATTTGACAACTCTTACTTCAAGGACATCAAAGAAAAAAAGGATGAAGATCTATTGGTATTGCCAACTGATGCTGCTCTTTTTGAAGACCCATCCTTCAAGGTATATGCTGAGAAATATGCTGAAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCCCATGCAAAACTTAGCAACCTTGGAGCCAAATTTGATCCTCCAGAGGGCATTGTGATAGATGATTCTCCAAATGCAGGGGCAGAGAAGTTTGTAGCAGCCAAGTACTCCACTGGAAAGAGAGAACTGTCTGACGGTATGAAGCAGAAGATACGGGCTGAATATGAGGCGATTGGTGGAAGCCCAGATAAGCCTCTACAGTCAAACTATTTTCTAAATATCATAATTATTATTGCTGTTTTGGCATTTTTGACATCACTGCTTGGAAACTAG 1308 0.4572 MAERVSLPLPSQSQLSPTTTMALLGAASSSARIIPSVSLSSSSRSFFSLSSSSSKLQCLRSSPRISHLFLNQRRAEVRVSSGGYGTVSAPKSVASDPDQLKSAREDIKELLNSKFCHPILIRLGWHDAGTYNKNIEEWPQRGGANGSLRFEIELKHGANAGLVNALKLLQPIKDKYSGVTYADLFQLAGATAVEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPDAGPPSPADHLRQVFYHMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKEKKDEDLLVLPTDAALFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVIDDSPNAGAEKFVAAKYSTGKRELSDGMKQKIRAEYEAIGGSPDKPLQSNYFLNIIIIIAVLAFLTSLLGN* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2073 435 MobiDBLite consensus disorder prediction 254 283 - -
Gso4g2073 435 ProSiteProfiles Plant heme peroxidase family profile. 179 404 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso4g2073 435 Pfam Peroxidase 104 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso4g2073 435 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 388 435 IPR044831 GO:0004601|GO:0034599
Gso4g2073 435 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 21 371 IPR044831 GO:0004601|GO:0034599
Gso4g2073 435 PRINTS Plant ascorbate peroxidase signature 96 116 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso4g2073 435 PRINTS Plant ascorbate peroxidase signature 117 132 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso4g2073 435 PRINTS Plant ascorbate peroxidase signature 178 196 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso4g2073 435 PRINTS Plant ascorbate peroxidase signature 197 209 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso4g2073 435 PRINTS Plant ascorbate peroxidase signature 316 340 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gso4g2073 435 SUPERFAMILY Heme-dependent peroxidases 98 356 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso4g2073 435 ProSitePatterns Peroxidases proximal heme-ligand signature. 247 257 IPR019793 -
Gso4g2073 435 CDD ascorbate_peroxidase 88 358 - -
Gso4g2073 435 MobiDBLite consensus disorder prediction 212 233 - -
Gso4g2073 435 Gene3D Peroxidase, domain 2 225 348 - -
Gso4g2073 435 Gene3D - 103 356 - -
Gso4g2073 435 PRINTS Haem peroxidase superfamily signature 117 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso4g2073 435 PRINTS Haem peroxidase superfamily signature 179 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso4g2073 435 PRINTS Haem peroxidase superfamily signature 197 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso4g2073 435 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso4g2073 435 PRINTS Haem peroxidase superfamily signature 287 302 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso4g2073 435 PANTHER L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED 21 371 - -
Gso4g2073 435 PANTHER L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED 388 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2073 Gso-Chr4 51176762 51182783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g2073 120 350 Peroxidase AT2G18140 28.897 1.42e-17 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2073 K00434 - gmx:100802238 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2073 4 51176762 51182783 Gso4g2073 4 51176762 51182783 ECH