Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2070 ATGGAGTTTGTGGATACCAGAAAACTACAATTACAACATCAACAACAACTGCAACAACAGCCGCAACATTTTCATGTGTTGGCAGTGGACGACAGTGTCATAGATAGGAAGCTATTGGAGAGGCTCCTTAGAGGTTCTTCATGCAAAGTTACCTGTGTGGACTCTGGAGACAAGGCTTTGAAATATCTTGGGCTAATAGATGAGCTTGATGATACTTCTTCAACCTCTTTAGAATCAGAATCTTCTCATCCTCCACCTCAACCATTACAACGAGAGGGAATCAAAGTGAATTTGATCATGACAGACTATTGCATGCCTGGGATGAGTGGCTATGATTTACTCAAACGAGTCAAGGGATCTTCTTGGAAAGATGTTCCAGTCGTGATTATGTCATCAGAAAATGTACCTTCCAGAATCAGCATGTGCTTAGAAGAAGGGGCAGAAGAGTTTCTATTGAAGCCTCTTCAGTTATCGGATTTGGATAAGCTTCAGCCGTACTTTCTGAAATCCGTTGATAATTCCTGTGAAAAAGAATCTGCTAACAGTTCCATAGATTCAGACAATGACAATGTCATCAACAACAACAGCAATAACAGTAACAGTAACAATAACAACAATAATAGCATCAGCAAAAGGAAGGCCATGTCTCCTGAGCCTCATCGGGAGGAGAGATCAAGACCCAAAATGAAAGAGTTAGCGGTGGTGTAA 708 0.411 MEFVDTRKLQLQHQQQLQQQPQHFHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDELDDTSSTSLESESSHPPPQPLQREGIKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRISMCLEEGAEEFLLKPLQLSDLDKLQPYFLKSVDNSCEKESANSSIDSDNDNVINNNSNNSNSNNNNNNSISKRKAMSPEPHREERSRPKMKELAVV* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2070 235 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 234 IPR045279 GO:0009736
Gso4g2070 235 CDD REC_typeA_ARR 26 163 - -
Gso4g2070 235 MobiDBLite consensus disorder prediction 73 92 - -
Gso4g2070 235 Pfam Response regulator receiver domain 95 161 IPR001789 GO:0000160
Gso4g2070 235 SMART REC_2 24 164 IPR001789 GO:0000160
Gso4g2070 235 MobiDBLite consensus disorder prediction 178 235 - -
Gso4g2070 235 ProSiteProfiles Response regulatory domain profile. 25 168 IPR001789 GO:0000160
Gso4g2070 235 MobiDBLite consensus disorder prediction 178 213 - -
Gso4g2070 235 MobiDBLite consensus disorder prediction 214 235 - -
Gso4g2070 235 SUPERFAMILY CheY-like 23 162 IPR011006 -
Gso4g2070 235 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 11 234 - -
Gso4g2070 235 Gene3D - 25 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2070 Gso-Chr4 51140891 51144559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g2070 23 170 Response Regulator Gene Family AT3G57040 60.403 1.43e-60 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso4g2070 Response_reg 2.1e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2070 K14492 - gmx:100801334 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2070 4 51140891 51144559 Gso6g0975 6 9397942 9401687 GST