Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2051 ATGATTGAAATGGGGTCGTGTGGGAGATCTGCTGCCATTGATGATCCCTCAGAAAAGTTTGTAATTGAGCAGCAGCATTTGTGCTCAGAGGTTCAAGAGCAGGTTGTTTCTGTGCAGGAGTCTTGTTTAGAAGAAGAGGCTTACAATGTGGTGGACTCTAATGTTGAGCTCTCCACTGTGACTGATGGTTGTCTGCGAGGGGACCGTGTCAGTTCTGAAGGACGTGTTGATGTTACCGAGGGGTCCGGAGAGGGTTTGGGTTTGGCGAGTGAATGCAAAAATGCTGATTTGTTGCCACTGGAGAAATCTACTCAGGATGATTGTCAGAATTGTTTGGGTGTTTCTTGTGGGAGCATTGAAGTTCTCTGTGTAAACAGTGGCTCAGAGGGAAATTTTCAGAATGAGGGTATCTTTGATCAGCTGTCGGGGTCCTTAACTGCAGATGATTCACAGAGGCATTGTGCTCAACAGGATGAGCAGAAGGATAATAAGAGTGACGTATTGCCTGCAGCAGGAGATGATTCGGATGTCGTGGAAGGCAAAAATGATGAGACTGGTGTTCTTGCTGATGCTTTCAGTCATGCACTTGATTTCAGGGATTGCGAAGTGTCTTTGGAATCAGAATCCATGGCTGACTTGCTAGTTGATTGCAACCAGCAAAGTGAGCAGGAGAAAATTATGAGAAATCCAGATCCCTTGTTGAATGTAGTTGAAAAATGTGACGCTCTAATTGGGGAGGAAACTGATGCTTGCAGGAAGATATCTCCTACTCCGGCTATGGAAGTGCCATCAGGTGCATTATGTACAGATACAGAAGTAGAGAGCATAAATGATCACCCATGTGATCAGAAAGATGGTGAGGAAACTGATGCTTGCAGGCAGATATCTCCTACTCCGACTATGGAAGTGCCATCAGATGCATTATTTACAGATACAGAAGTAGAGAGCATAAGTGATCAGCCATGTGATCAGAAAGATGGTGAGGAAACTGATGCTTGCAGGAAGATATCTCCTACTCTGGCTATGGAAGTGCCATCAGGGCCACCATCAGGTGCATTATGTACAGATGCAAAAGTAGAGAGCACAAATGATCAGCCATGCGATCAGAAAGATATTGAGGATCAGAATAGTACTTGTGAAGAAAAGTTTAAAGCTTTTGTTGATGAAGAAGTCATCAACATTAATTCATGTATAAAAATATCATCCTCTCTAGATTGCCAGGAGACTGTTGCGAGCTCACCTGTAGTTGGTTTTCCTTGTGAGCCTGCCCTGTTGGATCCAGGGTGTGAAATGAAGAATGACATGCTGCAAATAGATGATTTCTGTAAATTGAAGGACTGTTCCTCAGAGGAAACTACCAACTCTACCTTTAGAAAACCATTTTCTCCTGAATCAGGTCTGCCCTCTGTTGCTTTAATTACCAACTGCTCTGCAAAGGATGTTCTTGATCTCCATTCTAAGGGTGATGATGTTTCCATTAATAATAATAATGCTGTTAACAATCCAGGGCAGATGGATAATGATGGAACAAAAGCTGTTGAAGTTGATTGTATCACTGAAAGCATACCGTTACCTTCTCTAAGGGATAGTCGAAGAACTAAATTTGGCCGTAAGACACAAACCAAAAAGGCTTCAAGAAATTGCAAGAACAAAACCAAGGTGACGCATTCAAATGGGGGTATGAAGCTAAACTTAGAGGCTGCTAGAAAGAAAAGAAGTTGTTTCTCCAAACCAGCTCGTTCTTCTGTCTGGGGATTGATTGGGAATATTGAACAGTTTTTTGAGCAAGATAATGAGCTTGGAGTTGGTGAAGCTGTGTGCCAAGAATTGGGGAAGGCTAGAAGCAAGCGTCAAAGTGGGAAAGCGGTTAAGAATGGTGCAAGTACTACCTCATTGAGTTCAGTACAGAAGTGTTCTGTTTCAACTACTCGTGTTCGTCTGAAGATTAAATTTGGGAAAGAAGTTGATTTAAGTTGCTCAAATGTCTTGATTCCAGAGTCAGTTGATGGTTTGGCTTCTGCTTCTTACTTGGTGTCTGATTCAGGTTCTCAGAAAGTAGCCGGCAATGCTGATGATAAAATTTCTGATGCGGTGGCTTTGGGAAATTCAGAATCTTTCAGTAATGACCTGGGCAAGGATGGTCTTGTTCTAAATGAACAAGTTGCAAATAACCCCTTAGAAACTACTGAAATAACAGAGAAGTCATATGGGGATGCAGAGGAACCTTGTCTTGCTGTTCCTCCTGAGAAGGTGGTTGAAGCATTGATTGAACCTATGAGTAATAAGGGTATGGATCCTGGAACCTCACCTGATTCTGAAGTTATCAATTCAATTCCCGAAGTCCAGATTGGAGAAAGACATCAAGAAGACGTACATCATGCTGTTTTAGGTTCTTCTAAAGAATTAAATTCTAAATTGGATGTTACCATCAGTAAGAGAGGGAAGAAGAAAGAGAAACTTATTTGTTCTGGTAATTGTATCACTGAAGATGGATCACAAGGTCCACGTGGGAATAGTAGAGCTAAGCATTCAAAGAATCACAGACGTAAGAAAAATTGCAGGGATGCATTTAGCTCTTTGGAGTTGCCCACTGAGATAAGCAAATCTGTGACCAGTAAAGAATTGTCCCCAGAATTATTGCCCCATTCTGGAGAGACCGAACTTGGAGGCTCCGTCGAGGCTTTGAAAGTTAAAAATCATATGGACGCTAAGACAAGTAATAAACCATCTGTTGACCATGGATTTTCAGATTCCCTGGTTTCTGAGAAAATGCTGTCATCTGCAAGACCTTTGGGGCGTAAACTACCTAAAAGTCTTAGACCTAGTAAAGTTAGCAAGACCAAATCTAAAGCTTCTGACTCATCTGGCAGGAAAAAGACTACTGCTGGTACATGCAAGGAGAAACAGAAAAATCCAATTAATAAGAGCAAAGTCAAGGGAAAAGGTGCCTCTCTTAAAGTTACATGTGAAGTGGAAGATTGCCCACATCCAGAAGCAAATGCTGGAAATCATAAGCTGGATGCTATTGGAAAAATTATTGCTGATGACAACAGAGTATCGGTCAATGTATCTAATTTGGACATGCTGTCTGGTGTTGGTTTTGGGGAGCAAATTCTATCACCCCGCAATGCATGGGTGCGTTGTGATGATTGTCACAAGTGGCGGCGAATTCCAGCTGTGCTAGCAGACCGAATTGATGAAACTAACTGCACCTGGACATGTAAGGACAGCAGTGATAAAGCCTTTGCTGATTGTGCTATCCCTCAAGAAAAGTCTAATGCAGAGATTAATGCGGAGTTGGGATTATCAGATGCCTCGGGTGAAGAAGATGCATATGAAGGTTCCAAAAATTTTAAGGAATTAGAATATTGGCCACCTATAGTTTCCCAGGAGTCAACTTTTACCAATATTTTGACCAATGAATTTCTGCATCGTAGCCATAAAACTCAGACTATTGACGAGATAATGGTATGTCATTGCAAGCCATCTCAAGGAGGAAAGTTAGGCTGTGGGGATGAATGTCTAAATCGGATTCTTAATATCGAATGTGTGCAAGGAACCTGCCCATGTGGGGACCGTTGTTCCAACCAGCAGTTCCAAAAACACAAGTATGCTAGCCTGAAGTGGTTTAAATGTGGGAAAAAGGGTTACGGACTGAAGGCAATTGAGGATGTAGCTCAAGGCCAGTTTCTTATTGAATACGTTGGAGAGGTGCTTGATATGCAAACGTATGAGGCACGGCAAAGAGAGTACGCTTTGAAGGGCCATCGGCATTTCTATTTTATGACCTTGAATGGTAGTGAGGTGATAGATGCAAGTGCAAAAGGAAACTTGGGGCGTTTCATTAATCATAGTTGTGATCCTAATTGTCGGACAGAAAAGTGGATGGTGAATGGGGAAATCTGTATTGGACTGTTTGCATTGAGGAATGTTAAGAAGGATGAAGAATTGACATTCGATTACAACTATGTAAGGGTTTTTGGTGCTGCTGCCAAAAAATGCTATTGTGGTTCGTCTAACTGTCGAGGTTATATAGGTGGTGGTGATCCACTTAATGCTGAATTGATAGTTCAAAGTGATTCAGAAGAAGAATTTCCCGAACCTGTTATGCTTACCAAAGATGGTGAAATTGAAGATGCTGTACCTACACCCAAGTATTTTAATAATGTTGATACAGAATCTGCTAAACATATGTTGAAAGACAGGGATATATTGGAAAATCCTACAACTGCTATAGATTCAGATGGTTCTCCAGAGAAAGAGAGTTCTATGAACCCTGCCTCTGCCGTTTCTCTGTTGCACAGCTCAGCAGAAATGGAGGATTCAAAGGGCAAATTACCATCTTCTGTTAGAGATGAAGAAATTTCTCTACAAATGGAGGATGTAACAAGCAAACCCATGCCTTCTGTACACCAAGGATATGAAAAGGAATCAGAGTTTGCAGACAAAACTTCTTCCATTCAAAGATTAGAGACTACTTCTCCCCCTACAACTGTCAGCAAAATGTTACCGAATTCTGCTGGTAGTAATAGGGAGTCCAAGTCTGAAATAATTGGAGGCAAGAAGACTCCTAAGTTAAATGGTTCTGTTAAAAAGGGGAAGGTTCATGCTAATCCTCCAAATGGCCTTAAAACTGAGGTGACAGCCAATCGATTACAGGTGTCATCTATAAAACACAAAAAAGTAGAAGGTTCTTCCAATGGACGGTTTGAAGCAGTTCAGGAGAAACTTAATGAGTTGCTGGATGGAGATGGTGGAATAAGCAAAAGAAAAGATGCCACCAAAGGGTACTTGAAGCTTTTGTTTCTCACTGTGGCATCAGGTGATAGAATTAATGGTGAAGCTATTCAAAGCAATCGAGATCTTTCCATGATCCTTGATGCCCTTCTGAAAACAAAATCTAGAGCAGTGCTGAATGATATAATTAACAAAAATGGTTTACAGATGTTACATAACATTATGAAGCAGTACAGGCATGACTTCAAAAAAATTCCAATACTACGAAAGCTTCTTAAGGTCTTGGAGTTCCTAGAAGCAAGCAAGATTTTGACATCTGAACATATTAATGGTGGTCCTCCTTGTCATGGAATGGAGAGCTTTAGAGAGTCAATGCTTTCTCTGACAGAGCATGAAGACAAACAGGTCCATCAAATTGCTCGAAACTTCCGAGACAGATGGTTTCCCAGACACGCCAGAAAACATGGCTATATGGACAGGGATGATAACAGAGTGGAATCTCACAGAAGTTTCAAGTGCAACAGATTTTCAGCATCACACAGTCAGAGGCATGAACAGGATTTAAGGACTACAGAAGCAATTGATTGTAGTCAGCAGGCGATGCTTGTGACAACTCCAGTAGATGCTGAAACCTGGGAAGGCTGTCCTGTGCAGTCTCTAGATGGGGTTGAAATCAAAAGAGCTAAAAAACGCAAGCGCAAAAGCCGATGGGATCAACCAGCCGATACAAACTCGCATTCTGATGCCGTTATGAGCTCTATCGGTGAAAGCCAGAACATTCCCGAGGATGGTCCACCAGGGTTTTCATGTCCAGTAGGTTCATTAAATGCTTCCCTAAACTCTGGTAATCTTGCCTTGCAAAATGCAAGCCGTTCTGGATGCCCCTCTGATATAGTTATTGGTCATCCAAAAGAGAAATTTAACTCTCACTTGCCTGTCTCATATGGAATGCCATGGTCTGCCCAGCAATATGGAACACCTCATGCTGAATTTCCTGAGTGTTGGGTCACTGCACCTGGCATGCCTTTCAACCCATTTCCTCCACTACCCCCGTATCCACGGGACAACAAAGACTGTCAACCTTCTAATACTACTAATGCTATGATAATTGATCAGCCTGCTGAAGTTAAGCAGGGGGATACCAGTGGTATGGTTAATTGTTGCTCAGATGATATGATTCCCAGCACAACTGGTGTTAACTCTGAAGACTCCAACCTACTGTTTGAGGACGATAAACACAAACGATTGAAGGGTGATTCCAATGATTTGGGAACGAGGTACTTTAGACAGCAGAAAATACACCGACCATGGTTCAAGAGGAATGCATGGAAATGTGATGAGAACAACTCTTGTGGTGATATGTGCAGTATAGATGTAGGAGATGTACCAAAAGAGTCAAAAGTTACTTGTGACGCGGAGGATGCAATCTGTAGAGAGGAGTAA 6180 0.4196 MIEMGSCGRSAAIDDPSEKFVIEQQHLCSEVQEQVVSVQESCLEEEAYNVVDSNVELSTVTDGCLRGDRVSSEGRVDVTEGSGEGLGLASECKNADLLPLEKSTQDDCQNCLGVSCGSIEVLCVNSGSEGNFQNEGIFDQLSGSLTADDSQRHCAQQDEQKDNKSDVLPAAGDDSDVVEGKNDETGVLADAFSHALDFRDCEVSLESESMADLLVDCNQQSEQEKIMRNPDPLLNVVEKCDALIGEETDACRKISPTPAMEVPSGALCTDTEVESINDHPCDQKDGEETDACRQISPTPTMEVPSDALFTDTEVESISDQPCDQKDGEETDACRKISPTLAMEVPSGPPSGALCTDAKVESTNDQPCDQKDIEDQNSTCEEKFKAFVDEEVININSCIKISSSLDCQETVASSPVVGFPCEPALLDPGCEMKNDMLQIDDFCKLKDCSSEETTNSTFRKPFSPESGLPSVALITNCSAKDVLDLHSKGDDVSINNNNAVNNPGQMDNDGTKAVEVDCITESIPLPSLRDSRRTKFGRKTQTKKASRNCKNKTKVTHSNGGMKLNLEAARKKRSCFSKPARSSVWGLIGNIEQFFEQDNELGVGEAVCQELGKARSKRQSGKAVKNGASTTSLSSVQKCSVSTTRVRLKIKFGKEVDLSCSNVLIPESVDGLASASYLVSDSGSQKVAGNADDKISDAVALGNSESFSNDLGKDGLVLNEQVANNPLETTEITEKSYGDAEEPCLAVPPEKVVEALIEPMSNKGMDPGTSPDSEVINSIPEVQIGERHQEDVHHAVLGSSKELNSKLDVTISKRGKKKEKLICSGNCITEDGSQGPRGNSRAKHSKNHRRKKNCRDAFSSLELPTEISKSVTSKELSPELLPHSGETELGGSVEALKVKNHMDAKTSNKPSVDHGFSDSLVSEKMLSSARPLGRKLPKSLRPSKVSKTKSKASDSSGRKKTTAGTCKEKQKNPINKSKVKGKGASLKVTCEVEDCPHPEANAGNHKLDAIGKIIADDNRVSVNVSNLDMLSGVGFGEQILSPRNAWVRCDDCHKWRRIPAVLADRIDETNCTWTCKDSSDKAFADCAIPQEKSNAEINAELGLSDASGEEDAYEGSKNFKELEYWPPIVSQESTFTNILTNEFLHRSHKTQTIDEIMVCHCKPSQGGKLGCGDECLNRILNIECVQGTCPCGDRCSNQQFQKHKYASLKWFKCGKKGYGLKAIEDVAQGQFLIEYVGEVLDMQTYEARQREYALKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRNVKKDEELTFDYNYVRVFGAAAKKCYCGSSNCRGYIGGGDPLNAELIVQSDSEEEFPEPVMLTKDGEIEDAVPTPKYFNNVDTESAKHMLKDRDILENPTTAIDSDGSPEKESSMNPASAVSLLHSSAEMEDSKGKLPSSVRDEEISLQMEDVTSKPMPSVHQGYEKESEFADKTSSIQRLETTSPPTTVSKMLPNSAGSNRESKSEIIGGKKTPKLNGSVKKGKVHANPPNGLKTEVTANRLQVSSIKHKKVEGSSNGRFEAVQEKLNELLDGDGGISKRKDATKGYLKLLFLTVASGDRINGEAIQSNRDLSMILDALLKTKSRAVLNDIINKNGLQMLHNIMKQYRHDFKKIPILRKLLKVLEFLEASKILTSEHINGGPPCHGMESFRESMLSLTEHEDKQVHQIARNFRDRWFPRHARKHGYMDRDDNRVESHRSFKCNRFSASHSQRHEQDLRTTEAIDCSQQAMLVTTPVDAETWEGCPVQSLDGVEIKRAKKRKRKSRWDQPADTNSHSDAVMSSIGESQNIPEDGPPGFSCPVGSLNASLNSGNLALQNASRSGCPSDIVIGHPKEKFNSHLPVSYGMPWSAQQYGTPHAEFPECWVTAPGMPFNPFPPLPPYPRDNKDCQPSNTTNAMIIDQPAEVKQGDTSGMVNCCSDDMIPSTTGVNSEDSNLLFEDDKHKRLKGDSNDLGTRYFRQQKIHRPWFKRNAWKCDENNSCGDMCSIDVGDVPKESKVTCDAEDAICREE* 2060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2051 2059 ProSiteProfiles SET domain profile. 1205 1322 IPR001214 GO:0005515
Gso4g2051 2059 SUPERFAMILY SET domain 1139 1343 IPR046341 -
Gso4g2051 2059 MobiDBLite consensus disorder prediction 280 302 - -
Gso4g2051 2059 MobiDBLite consensus disorder prediction 926 979 - -
Gso4g2051 2059 MobiDBLite consensus disorder prediction 1400 1428 - -
Gso4g2051 2059 Gene3D SET domain 1103 1355 IPR046341 -
Gso4g2051 2059 ProSiteProfiles Post-SET domain profile. 1330 1346 IPR003616 -
Gso4g2051 2059 Pfam AWS domain 1168 1202 IPR006560 GO:0005634|GO:0018024
Gso4g2051 2059 ProSiteProfiles Zinc finger CW-type profile. 1039 1093 IPR011124 GO:0008270
Gso4g2051 2059 Pfam CW-type Zinc Finger 1045 1091 IPR011124 GO:0008270
Gso4g2051 2059 SMART set_7 1205 1328 IPR001214 GO:0005515
Gso4g2051 2059 MobiDBLite consensus disorder prediction 862 876 - -
Gso4g2051 2059 MobiDBLite consensus disorder prediction 1806 1828 - -
Gso4g2051 2059 MobiDBLite consensus disorder prediction 828 888 - -
Gso4g2051 2059 MobiDBLite consensus disorder prediction 1410 1428 - -
Gso4g2051 2059 MobiDBLite consensus disorder prediction 1494 1543 - -
Gso4g2051 2059 MobiDBLite consensus disorder prediction 946 974 - -
Gso4g2051 2059 MobiDBLite consensus disorder prediction 155 181 - -
Gso4g2051 2059 Gene3D - 1042 1102 - -
Gso4g2051 2059 MobiDBLite consensus disorder prediction 155 169 - -
Gso4g2051 2059 SMART PostSET_3 1330 1346 IPR003616 -
Gso4g2051 2059 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC 513 1991 - -
Gso4g2051 2059 SMART shorttest3 1153 1204 IPR006560 GO:0005634|GO:0018024
Gso4g2051 2059 PANTHER SET DOMAIN PROTEINS 513 1991 - -
Gso4g2051 2059 Pfam SET domain 1216 1322 IPR001214 GO:0005515
Gso4g2051 2059 ProSiteProfiles AWS domain profile. 1153 1203 IPR006560 GO:0005634|GO:0018024
Gso4g2051 2059 MobiDBLite consensus disorder prediction 1494 1513 - -
Gso4g2051 2059 CDD SET_SETD2 1204 1346 IPR044437 GO:0010452|GO:0046975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2051 Gso-Chr4 50934390 50948965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g2051 1188 1345 C2H2 Transcription Factor Family AT2G23740 33.143 2.90e-20 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gso4g2051 SET 3.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2051 - - gmx:100778307 4072.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2051 4 50934390 50948965 Gso4g2051 4 50934390 50948965 ECH
Gso4g2051 4 50934390 50948965 Gso6g0999 6 9642166 9656792 GST