Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2047 ATGCCTCCGCGGCGGTGCACGGCGGCGTATTCGGCAGTGGCGCAGATGGGCAGCAACACGAGCGAGAGCGACGCGGAGGAGCTGGTGATGCGGTGCCTCTCGTGCGAGGAGGAGTACGACGTGGACGACTCGGGAACCTGCAGGGAGTGCTACCAGGAGGCCAACGAGGCCGAGGAGGAGCTCCGCCACGAGATCGAGGAGCTCAAATCCAAAGTCTCCTTCCTCACTCTCCCCTCTCCCAATCTTAACGCTTCCACCGCCGATGTCGTCCTCGTTCCCGTCGACGACTCCGACGACGCTCCCATTCCCGCTCACAAGCATCTTCTGGTTAGTCGCTCTCCTGTTTTCAGAGCAATGCTCAAGAATGATATGACAGAAAGGCGGAGTGGCACCATCAAGATTTCTGACGTATCATATGATACCCTTCATGCTTTTGTTAATTATTTATACACTGCTGAAGCGTCCCTTGATAACGAATTGGCCTGTAACCTGTTGGTTTTAGGAGAAAAGTATCAGGTCAAGCATCTCAAGACATATTGTGAAAAGTATTTGATCGCCAAAATGAATTGGGATAAAGCTATTTCTAACTATGCCTTTGCATATCAATACAATTGCAAACAATTACAAAGTGTGTCCTTGGCAGTGATCTTGGACCACATGGACTCGCTCACTCAAAATGAATGTTATGCGGAGCTGGTGGACACTAATCCTCGTCTTGTTGTGGAAATATATGAAACATACATTGGCAGGCTATTAAATACTGCAGGCGCATTTTAG 777 0.4968 MPPRRCTAAYSAVAQMGSNTSESDAEELVMRCLSCEEEYDVDDSGTCRECYQEANEAEEELRHEIEELKSKVSFLTLPSPNLNASTADVVLVPVDDSDDAPIPAHKHLLVSRSPVFRAMLKNDMTERRSGTIKISDVSYDTLHAFVNYLYTAEASLDNELACNLLVLGEKYQVKHLKTYCEKYLIAKMNWDKAISNYAFAYQYNCKQLQSVSLAVILDHMDSLTQNECYAELVDTNPRLVVEIYETYIGRLLNTAGAF* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2047 258 SUPERFAMILY POZ domain 84 185 IPR011333 -
Gso4g2047 258 PANTHER SPECKLE-TYPE POZ PROTEIN 26 255 - -
Gso4g2047 258 Gene3D - 189 251 - -
Gso4g2047 258 PANTHER GH01369P 26 255 - -
Gso4g2047 258 SMART BTB_4 87 188 IPR000210 GO:0005515
Gso4g2047 258 Coils Coil 47 71 - -
Gso4g2047 258 ProSiteProfiles BTB domain profile. 87 158 IPR000210 GO:0005515
Gso4g2047 258 Gene3D Potassium Channel Kv1.1; Chain A 45 188 IPR011333 -
Gso4g2047 258 Pfam BTB/POZ domain 84 186 IPR000210 GO:0005515
Gso4g2047 258 CDD BTB_POZ_ZBTB_KLHL-like 87 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2047 Gso-Chr4 50887453 50890137 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Gso4g2047 BTB 2e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2047 K10523 - gmx:100794443 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2047 4 50887453 50890137 Gso4g2047 4 50887453 50890137 ECH
Gso4g2047 4 50887453 50890137 Gso6g1003 6 9694141 9696756 GST