Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2028 ATGTCTCAGGGAAGAGGCAGTGCATCTTTACCTATTGTGGTCACTGTGGTTTCACTACTGTGCCTTTTGGTTCTTTTGGAACGTGCTGATGCAGCAACTTACACCGTTGGAGGACCTGGGGGATGGACCTTCAACACTAATGCTTGGCCCAAAGGAAAAAGATTCAGAGCTGGTGATATCCTAATCTTCAATTATGATTCAACGACCCACAATGTGGTTGCTGTGGACAGAAGTGGATACAACAGCTGCAAAACGCCAGGGGGTGCTAAAGTGTTCAGTTCAGGGAAGGACCAAATCAAACTAGCAAGAGGGCAGAACTACTTCATATGCAACTACCCTGGTCACTGCGAATCTGGGATGAAAGTTGCCATTAATGCAGTGTGA 384 0.4661 MSQGRGSASLPIVVTVVSLLCLLVLLERADAATYTVGGPGGWTFNTNAWPKGKRFRAGDILIFNYDSTTHNVVAVDRSGYNSCKTPGGAKVFSSGKDQIKLARGQNYFICNYPGHCESGMKVAINAV* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2028 127 CDD Plantacyanin 32 126 IPR041844 -
Gso4g2028 127 PANTHER BLUE COPPER PROTEIN 5 125 IPR039391 GO:0009055
Gso4g2028 127 SUPERFAMILY Cupredoxins 32 126 IPR008972 -
Gso4g2028 127 Gene3D - 32 127 IPR008972 -
Gso4g2028 127 ProSiteProfiles Phytocyanin domain profile. 32 127 IPR003245 GO:0009055
Gso4g2028 127 PANTHER BASIC BLUE-LIKE PROTEIN 5 125 - -
Gso4g2028 127 Pfam Plastocyanin-like domain 42 120 IPR003245 GO:0009055
Gso4g2028 127 ProSitePatterns Type-1 copper (blue) proteins signature. 104 120 IPR028871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2028 Gso-Chr4 50655336 50656713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g2028 1 127 Phytocyanin Superfamily AT1G17800 40.580 4.22e-27 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2028 - - gmx:100788635 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2028 4 50655336 50656713 Gso4g2028 4 50655336 50656713 ECH
Gso4g2028 4 50655336 50656713 Gso6g1021 6 9938118 9939349 GST