Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2026 ATGTCATTAGTTAGGTCTGCTGATCTAGCTCCAACATCATATGAAAATGCTAAGCTCTTCTCACTGAAGGGAACTGATGTTCGACCGGGGCTGTCCTCACAAATTTTTGGTCCTGATAAGCATAGGAGCACGTACATGACGGATACTTACCCCAGCGAGAGTTATGAGAAGTACTTCCATGACTCACAAACAGAAGAAATAATAGAACCATCTAGTTCCAGCATCTCTGGAAGTTCAATTCACCCTGATGTAGCCTCTTCTTACCAGATCAGAGCCATTTCAGGAGCTTCTATGGTTGCCAACAACCCATTTGATTCTTCTTTCATGTCTACAAGGCATCGTGATGCTTATCAGTCAAACTCTGGATCAGATTTGATGGAGAATGGAAGCCTGGATTCACGCAACGATGATGGTCTAATGAGATTAAAACTACAAGCATTGGAAAGGGCATTGCTTGATGATAGTGATGCTGAAGAAGAGGAGGAAGAAGAGGAAGACATATTTGAGGCTGCTCAAAGCATGGAAATTGATCCTGACATAGCTGAGTGGGCTGATTCGATGCAGAATATGCTGCTCCATGATTCACCAAAGGAGACCTCTTCTTCAGATTCCAATATTAGCAGCATCAGCAGCACCAAAGAAATATCTCAAACTTCTCAGAACCCCAGGAAGTTGCTTTATGAATGTGCTATTGCACTTTCAGAAGGAAATGAAGTGGAAGGATCATCTATGATAAACAATCTCCGGCAGATGGTCTCAATTCAGGGAGAGCCTTCTCAAAGAATTGCAGCCTATATGGTTGAGGGACTTGCAGCTCGCCTGGCCGAATCCGGCAAAAGTATTTACAAAGCTCTGAGATGCAAGGAACCTCCAACTTCAGATCGTCTAGCAGCTATGCAGATACTGTTTGAGGTTTGCCCATGTTTCAAATTTGGATTCATTGCTGCTAATAATACAATTACAGAAGCAGTGAAAGATGACATGAAGATTCATATAATAGATTTTGACATCAATCAAGGAAGTCAGTACATAAATCTAATCCAAACACTTGCTTCAAGGTCAAGCAAGCCACCCCATGTTAGGTTGACTGGAGTTGATGATCCTGAGTCTGTGCAGCGATCTGTTGGAGGCCTACAGAACATAGGACAAAGACTAGAAAAACTTGCAGAGGCACTTGGTTTGCCATTCGAGTTTCGAGCAGTGGCATCAAGGACTTCCATTGTCACCCCATCAATGCTCGACTGTAGTCCTGATGAAGCACTTGTGGTGAACTTTGCATTCCAGCTTCATCACATGCCCGACGAGAGTGTTTCAACAGCAAACGAACGGGACCAACTTCTTCGCTTGGTGAAGAGCTTGAATCCAAAGCTTGTGACAGTGGTGGAGCAAGATGTGAACACAAACACCACCCCCTTCTTACCTAGATTTGTTGAGGCCTACAATTATTACTCTGCTGTGTTTGAGTCACTTGATGCTACTCTTCCTAGAGAAAGCCAAGACAGGATGAATGTTGAAAGGCAATGCTTAGCAAGGGACATTGTCAATGTCGTTGCGTGTGAGGGCGAGGATAGGATAGAACGGTATGAAGTTGCAGGAAAATGGAGAGCAAGGATGACAATGGCTGGCTTCACTTCATCCCCCATGAGCACAAATGTGACTGATGAAATCCGACAACTCATTAAGGTGGTGTATTGCGACAGGTACAAGATTAAGGAGGAAATGGGTGCACTTCACTTTGGTTGGGAAGACAAAAGCTTGATCGTTGCTTCAGCATGGAAGTTACCAAGATAA 1791 0.4383 MSLVRSADLAPTSYENAKLFSLKGTDVRPGLSSQIFGPDKHRSTYMTDTYPSESYEKYFHDSQTEEIIEPSSSSISGSSIHPDVASSYQIRAISGASMVANNPFDSSFMSTRHRDAYQSNSGSDLMENGSLDSRNDDGLMRLKLQALERALLDDSDAEEEEEEEEDIFEAAQSMEIDPDIAEWADSMQNMLLHDSPKETSSSDSNISSISSTKEISQTSQNPRKLLYECAIALSEGNEVEGSSMINNLRQMVSIQGEPSQRIAAYMVEGLAARLAESGKSIYKALRCKEPPTSDRLAAMQILFEVCPCFKFGFIAANNTITEAVKDDMKIHIIDFDINQGSQYINLIQTLASRSSKPPHVRLTGVDDPESVQRSVGGLQNIGQRLEKLAEALGLPFEFRAVASRTSIVTPSMLDCSPDEALVVNFAFQLHHMPDESVSTANERDQLLRLVKSLNPKLVTVVEQDVNTNTTPFLPRFVEAYNYYSAVFESLDATLPRESQDRMNVERQCLARDIVNVVACEGEDRIERYEVAGKWRARMTMAGFTSSPMSTNVTDEIRQLIKVVYCDRYKIKEEMGALHFGWEDKSLIVASAWKLPR* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2026 596 ProSiteProfiles GRAS family profile. 213 593 IPR005202 -
Gso4g2026 596 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 10 594 IPR030011 GO:0003700|GO:0005634
Gso4g2026 596 MobiDBLite consensus disorder prediction 193 217 - -
Gso4g2026 596 Pfam GRAS domain family 223 593 IPR005202 -
Gso4g2026 596 Coils Coil 144 164 - -
Gso4g2026 596 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 594 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2026 Gso-Chr4 50618091 50621847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g2026 1 593 GRAS Transcription Factor Family AT1G21450 60.972 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso4g2026 GRAS 2.6e-136 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2026 - - gmx:100788103 1097.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2026 4 50618091 50621847 Gso4g2026 4 50618091 50621847 ECH
Gso4g2026 4 50618091 50621847 Gso6g1023 6 9965582 9969299 GST
Gso14g1279 14 34219035 34222962 Gso4g2026 4 50618091 50621847 PCT
Gso13g0210 13 11601733 11605579 Gso4g2026 4 50618091 50621847 PCT
Gso4g2026 4 50618091 50621847 Gso14g1279 14 34219035 34222962 PCT
Gso4g2026 4 50618091 50621847 Gso13g0210 13 11601733 11605579 PCT