Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2024 ATGGTGCCTCCGGGGCCACCCACTCCCATTGGTGGTGCCCAGTCTGTTTCGCCTTCTCTCTTAAGATCGAATTCGGGAATGCTAGGAGCTCAAGGGGGTCCCATGCCGCCACAGTCGTCTTTCCCTTCACTCGTCTCACCACGCACTCAGTTCAACAACATGAATATTCTAGGAAATATGTCCAATGTGACTTCCATACTGAATCAGTCTTTCCCAAATGGAGTTCCGAATCCCGGGCTCTCTGGTCCTGGAAACAGCCAGCGTGGAGCAATTGATACTGGAGCTGAAAAAGATCCAGTCTCCAGTGTTGGCAATGGAATGAACTTCAATAATTCTTCGTCCACATTTGTACAGTCAAGTATAGTGAATGCTGCTTCCTCTGGTCAAGGTCAGGGTCAACAATTTTCAAACCCTTCTAGTAACCAGCTGTTGCAAGATCAACAACATTCCCAACAGCTTGAACCTCAAAATTTCCAACATGGTCAGCAGTCAATGCAACAGTTCTCTGCTCCCCTGAATACACAGCAACCGCCGCAGCCGCAGCAGCATTTTCAATCAATTCGAGGAGGGATGGGTGGTATGGGACCTGTAAAGCTGGAGCAGGTAAGCAATGATCAACTCGGACAACAGCAGCAGCAGCAGTTGCAATCCTTGAGGAATTTAGCTTCAGTGAAGTTGGAACCACAACAAATGCAGACAATGAGAACTCTGGGACCTGTTAAAATGGAGCCTCAGCATTCTGATCAACCATTATTTATGCAGCAGCAGCAACAACAGCAGCAACAGCAACAGTTTCTCCACATGTCAAATCAATCGTCTCAGGCTGCTGCTGCCCAGATCAATCTTTTGCGCCATCACAGGCTTTTACAGTTACAACAACAACACCAGCAGCAACAACTCTTGAAGGCAATGCCACAACAGCGGTCCCAACTACCACAACAATTTCAACAGCAGAATATGCCTATGAGATCTCCTGTGAAGCCAGCATATGAACCAGGGATGTGTGCTAGGCGGCTGACACATTACATGTATCAGCAACAACATAGACCTGAAGATAACAATATTGATTTCTGGAGAAAGTTTGTTGCTGAGTATTTTGCTCCTAATGCCAAAAAGAAATGGTGTGTTTCAATGTATGGAAGTGGAAGACAAACAACTGGAGTTTTCCCTCAGGATGTATGGCACTGCGAAATATGTAATCGCAAGCCTGGCCGTGGATTTGAAGCAACTGTTGAGGTTCTTCCACGGCTTTTCAAGATAAAGTATGAAAGTGGTACTTTGGAAGAACTACTTTATGTTGACATGCCTCGTGAATATCATAATTCCTCTGGTCAGATTGTTCTAGATTATGCAAAAGCAATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGCCAACTTCGAATAGTTTTCTCTCCGGACCTGAAGATATGTTCTTGGGAATTTTGTGCTCGGCGCCATGAGGAGCTCATACCCAGGAGATTGTTGATACCACAGGTTAGTCAGCTTGGAACGGTTGCTCAAAAATACCAGTCTTTTACTCAAAATGCAACACCCAATGTATCTGTTCCCGAATTACAAAATAATTGCAATATGTTTGTTGCATCAGCCCGTCAGTTGGCTAAAGCCTTAGAAGTACCATTGGTTAATGATTTAGGATATACAAAGAGATACGTGCGCTGCCTACAGATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCAGAGAAACTGGGACTGGACCTATGGAGAGCTTAGCAAAATTCCCTCGGAGAACAAGTGGTTCATCTGGACCTCGTGGTCAAGCACAACAGCATGAAGAACAATTACAACAGCAGCAACAACAACAGATGGTGGCCCATAACTCAAATGGTGATCAAAACTCAGTACAAGCTGCTGCCATGCAAATTGCTTCTAGCAATGGTATGGTTAGTGTAAATAACACTGTCAACCCAGCATCCACATTAACCTCCACAAGCACTATTGTTGGTCTTCTTCACCAGAACTCTATGAATTCTAGACAACCAAATTCAATGAACAATGCAAGCAGTCCATATGGAGGTAGTTCTGTTCAGATTCCATCCCCAGGTTCCTCCAGTACAGTGCCACAAGCCCAGCCAAACTCATCCCCTTTTCAATCACCAACACCATCCTCTTCTAACAACCCCCCACAAACATCTCACCCTGCTTTAACATCTGCCAATCACATGAGTACAACAAACTCTCCAGCTAATATTTCCATGCAACAACAGCAGCCATCTATTTCTGGTGAACCTGACCCTAGTGATGCTCAAAGCTCAGTCCAGAAAATCATACACGAGATGATGATGTCCTCCCAGATTAATGGCAATGGTGGAATGGTTGGTGTCGGATCTCTTGGAAATGATGTGAAGAATGTAAATGGTATTCTGCCAGTGAGTGCCAATACAGGGCTCAATGGTGGCAATGGCTTGGTGGGTAATGGCACAATGAACAGTAATTCAGGCGTTGGGGTTGGTAATTATGGCACAATGGGTCTCGGTCAATCTGCTATGCCTAATGGAATCAGATCTGCTATGGTAAATAATTCAATCATGAATGGAAGGGGAGGAATGGCGTCTCTTGCCCGGGATCAAGCTATGAATCATCAACAGGATATGTCAAACCAACTACTTAGTGGACTAGGGGCCGTTGGTGGTTTTAGTAATCTTCAATTTGATTGGAAACCTTCTCCTTGA 2736 0.4452 MVPPGPPTPIGGAQSVSPSLLRSNSGMLGAQGGPMPPQSSFPSLVSPRTQFNNMNILGNMSNVTSILNQSFPNGVPNPGLSGPGNSQRGAIDTGAEKDPVSSVGNGMNFNNSSSTFVQSSIVNAASSGQGQGQQFSNPSSNQLLQDQQHSQQLEPQNFQHGQQSMQQFSAPLNTQQPPQPQQHFQSIRGGMGGMGPVKLEQVSNDQLGQQQQQQLQSLRNLASVKLEPQQMQTMRTLGPVKMEPQHSDQPLFMQQQQQQQQQQQFLHMSNQSSQAAAAQINLLRHHRLLQLQQQHQQQQLLKAMPQQRSQLPQQFQQQNMPMRSPVKPAYEPGMCARRLTHYMYQQQHRPEDNNIDFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGTVAQKYQSFTQNATPNVSVPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKFPRRTSGSSGPRGQAQQHEEQLQQQQQQQMVAHNSNGDQNSVQAAAMQIASSNGMVSVNNTVNPASTLTSTSTIVGLLHQNSMNSRQPNSMNNASSPYGGSSVQIPSPGSSSTVPQAQPNSSPFQSPTPSSSNNPPQTSHPALTSANHMSTTNSPANISMQQQQPSISGEPDPSDAQSSVQKIIHEMMMSSQINGNGGMVGVGSLGNDVKNVNGILPVSANTGLNGGNGLVGNGTMNSNSGVGVGNYGTMGLGQSAMPNGIRSAMVNNSIMNGRGGMASLARDQAMNHQQDMSNQLLSGLGAVGGFSNLQFDWKPSP* 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2024 911 MobiDBLite consensus disorder prediction 596 635 - -
Gso4g2024 911 MobiDBLite consensus disorder prediction 125 198 - -
Gso4g2024 911 MobiDBLite consensus disorder prediction 1 47 - -
Gso4g2024 911 MobiDBLite consensus disorder prediction 125 186 - -
Gso4g2024 911 PANTHER LIM DOMAIN-BINDING PROTEIN 1 910 IPR029005 -
Gso4g2024 911 MobiDBLite consensus disorder prediction 68 107 - -
Gso4g2024 911 MobiDBLite consensus disorder prediction 676 773 - -
Gso4g2024 911 MobiDBLite consensus disorder prediction 582 635 - -
Gso4g2024 911 Pfam LIM-domain binding protein 338 592 IPR029005 -
Gso4g2024 911 MobiDBLite consensus disorder prediction 68 88 - -
Gso4g2024 911 MobiDBLite consensus disorder prediction 12 26 - -
Gso4g2024 911 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 910 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2024 Gso-Chr4 50602912 50612925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g2024 1 907 C2H2 Transcription Factor Family AT1G43850 60.423 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2024 - - gmx:100787573 1580.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2024 4 50602912 50612925 Gso4g2024 4 50602912 50612925 ECH
Gso4g2024 4 50602912 50612925 Gso6g1025 6 9974920 9983902 GST