Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2011 ATGAAGGAACTGGGCTTGGTTTCAATGATGCTGATGGCAGAGTTGTTGGACGTGATCGTCAACACTCTAAGCAAAGCAGCCATGAAGAAGGGCATGAATGACTTTGTATTCATCATGTACTCCAATGCCTTCGCTGCATGCCTCCTCCTTCTCTTAGCCTTATTCTTTTATAGGAAAAGAACACTTCCGCCACTCTCCTGTAACACCCTTGGCCTATTCCTTGTTGTTGGCATGCTCAGGTACTTATTTACTTCACTTAGTTACAATTACAATTTGAGTTTCATGAAGGAATTTATGGTACTTCGTGTTCCCTTTTTTTCCCTTTGTCTTGCCTCTTGCAGTTGCATTAATCAGTCGATCAAGTTTTTCGGCATAGGTTACAGCTCTCCAACTTTGGCCTCAGCACTGTCCGATTTGGTGCCCGCCTTTACCTTCATACTTGCCGTCATCTTCAGGATGGAAAAATTAGATTGGAAAGCTAATAGCACTCTGGCCAAGTCCATTGGCACAGTGGTATCGATCGCTGGGGCATTGTTATTGTCTTTGTACAAAGGCCAAGCCATCATAAATAATAATCCACCTTTTAAATTGTTCCCTCAAAAACTTGTCTCATCCATGCAATTTGACTGGGTATTTGGGGCACTGTTGCTTGCAGCTCATAGCTGTTTTCTCTCAATAAACTACATTCTTCTGACACGGATAGTGAGAGAATACCCTGCAGAACTGGTGGTGGTACTCAGTCGCATTGCATTAACATCTATACTATCTGTTCCTGCTGCACTGATTTCAGTAAAGGATCTAAAAGCTTTGAGACTGGGATTTAATATGGAGCTTATAGCTATTGGATGTTCAGCAATTTTTGTCTTATCCTTTCGAGGTGTTATCCATATATGGATCATGGGGAAGAGGGGCCCTGTCTATGTTGCAATGTTTAAGCCACTCGAAATTGTCTTCGCAGTCATCTTGGGGGTTACTTTTCTTGGGGACTCTCTTTATATTGGAAGTGTGATCGGAGCTGCCATAATAGTTGTTGGTTTTTATGCTGTTATTTGGGGGAAAAGTCAAGAGAAGGTGGAGGAAGATTGTACAGTCTGCAGCTCTGAGTCATATGATAATGAGGTCCCTCTTTTACAGAACAAGAGAACGGGGGAATAA 1155 0.4234 MKELGLVSMMLMAELLDVIVNTLSKAAMKKGMNDFVFIMYSNAFAACLLLLLALFFYRKRTLPPLSCNTLGLFLVVGMLRYLFTSLSYNYNLSFMKEFMVLRVPFFSLCLASCSCINQSIKFFGIGYSSPTLASALSDLVPAFTFILAVIFRMEKLDWKANSTLAKSIGTVVSIAGALLLSLYKGQAIINNNPPFKLFPQKLVSSMQFDWVFGALLLAAHSCFLSINYILLTRIVREYPAELVVVLSRIALTSILSVPAALISVKDLKALRLGFNMELIAIGCSAIFVLSFRGVIHIWIMGKRGPVYVAMFKPLEIVFAVILGVTFLGDSLYIGSVIGAAIIVVGFYAVIWGKSQEKVEEDCTVCSSESYDNEVPLLQNKRTGE* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2011 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 270 354 - -
Gso4g2011 384 Pfam EamA-like transporter family 212 350 IPR000620 GO:0016020|GO:0016021
Gso4g2011 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 80 184 - -
Gso4g2011 384 PANTHER WAT1-RELATED PROTEIN 9 88 - -
Gso4g2011 384 PANTHER WAT1-RELATED PROTEIN 104 361 - -
Gso4g2011 384 PANTHER WAT1-RELATED PROTEIN 9 88 IPR030184 GO:0016021|GO:0022857
Gso4g2011 384 PANTHER WAT1-RELATED PROTEIN 104 361 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2011 Gso-Chr4 50465463 50468338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g2011 1 384 Nodulin-like Gene Family AT3G28050 37.626 5.10e-74 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2011 - - gsj:114410339 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2011 4 50465463 50468338 Gso6g1042 6 10133709 10136088 GST