Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1991 ATGATGGAGTGCAACAAAGATGAGGCAGTTAGGGCCAAAGAAATAGCAGAGAGGAAATTTTCAGAAAGGGAATATGTTGGTGCAAAGAAGTTTGCTCTCAAGGCTCAAAATCTGTATCCTGAGTTGGAGGATATTACCCAGCTTTTGACAACAATTGATATTTATACATCCGCTGAGAATAAAGTAAGCGGAGAAATGGATTGGTATGGTATACTTGGAGTGAGCCCCTTTGCTGATGAGGAGACTGTCAGAAAGCAATACAGGAAGCTGGCTCTCACCCTTCACCCTGACAAAAACAAGTCTTTGGGTGCAGAGGGTGCATTTAAGCTGGTTTCAGAGGCATGGAGTTTGTTATCAGATAAGACCAAGAGACTAGAATATAACCAGAAGAGGAGTTTGAAAGGATTCCAACATAATACTCCCAACCATGTTGGATCTCAACCAGAAGCACCCAGTTCAAATGGTTATTATAATCTAAAGAAGAATGTTAATTCAAATGTCAGGACTGGAAATAATAGTGGTCGGGCACCTTCAGCTCCGGTTAAAAAGGCTGAAACCTTTTGGACTATCTGTAATAGGTGCAGGACACATTATGAATATCTCAGGGTTTATTTGAATCACACCCTTTTATGTCCAAACTGTAATGAAGCTTTTGTCGCTGTAGAGAGGGGTCCACCACCAAATGTTTTTAAGCCACCAAATTGGTCTTCTCATCAACGGCATCAGAATTCTCAACACCATGCTGGAAGTAATAATACAAATTTTCAGTGGGGTTCTCACTCTAGAATGGCTGGTTTTGGTAGCACAGATGGATCAACATCTGTTGCAGCTCAAGCTGCAAGTGTTGTGCAGCAGGCAAGTGAGAAAGTAAGGAGGGAGGGTTCTTTTCACAAACCTATGAAAAAAAGGAAGACAGATGATATTCGCATTAATGGTTATCAAGGATACATGGCAAATCATATGGCTACAAGAGATGGAGCGGCTGGTTTGGGCACCTTCTCTGAACCAGGAAAGGTTAACTTGGAAACAGAAAGGAATTATGGTTTTTCAGGTCTTCCTGGCAAGCATTACAGCACAAGAGAATTGTCAATGTTTGAAATACGAAACATGTTGATGGATAAGTCGCGCATTGAAATTCGTAAGAAACTTCAAGAATGGAAATCAATGGCTGAAGCTAAGATTAACAAGGATAAAGAGAATAAGAGACAGAAAAGCACATTTAATGGCAAAACAACTGGTTCAGAGAAGCTGAGAGAGACTGCTGTTAATGGTAACAGGCATCTGGACATTGATTCTTTCCCTGTCAGATCTGATGATACAGTTAAGAAGAACCAAGCTTACGTTACAATCACTGTTCCAGACCCTGATTTTCATAATTTTGACTTGGATAGAGATGAAAATTCCTTTGCGGAGGATCAGGTCTGGGCTGCTTATGATGATGATGATGGAATGCCTCGTTATTATGCTAGAATTCACAAGGTGATCTCCATGAAGCCATTTAAAATGCGGATCAGTTGGCTTAACTCTCGAAGCAACAGTGAATTGGGCCCAATAGATTGGGTAGGTTCTGGTTTTTATAAAACTTGTGGGGATTTCAGAACTGGCAAGCATGAAATAACTGAATCATTAAATTCATTCTCTCACAAGGTTAGGTGGACAAAAGGCACAAGAGGTGTTGTTCGAATCTTTCCTGGGAAGGGGGAGGTCTGGGCTCTTTACAGAAACTGGTCTCGTGATTGGAATGAACATACCCCAGATGAAGTGATACACAAGTATGATATGGTGGAGGTTCTTGAAGATTTCAATGAAGAACAAGGCATATTAGTTACCCCCCTTGTTAAGGTTGCTGGTTTTAGGACTGTGTTTCAAAGGCACATGGACCGTGATCGGGAGAGGATGATTCCTAAAGAGGAAATGTTTCAATTCTCTCATCAGGTTCCGAATTACTTGCTTACTGGCCAAGAAGCTGATAATGCTCCAAAGGATTGTCGAGAGTTGGATCCAGCCGCTACTCCTTTAGACCTCCTCCAGATAATAACAGAAGCTAATGAGACATCGAAAAATGCTTTGGAAGCCTGA 2079 0.4132 MMECNKDEAVRAKEIAERKFSEREYVGAKKFALKAQNLYPELEDITQLLTTIDIYTSAENKVSGEMDWYGILGVSPFADEETVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSLKGFQHNTPNHVGSQPEAPSSNGYYNLKKNVNSNVRTGNNSGRAPSAPVKKAETFWTICNRCRTHYEYLRVYLNHTLLCPNCNEAFVAVERGPPPNVFKPPNWSSHQRHQNSQHHAGSNNTNFQWGSHSRMAGFGSTDGSTSVAAQAASVVQQASEKVRREGSFHKPMKKRKTDDIRINGYQGYMANHMATRDGAAGLGTFSEPGKVNLETERNYGFSGLPGKHYSTRELSMFEIRNMLMDKSRIEIRKKLQEWKSMAEAKINKDKENKRQKSTFNGKTTGSEKLRETAVNGNRHLDIDSFPVRSDDTVKKNQAYVTITVPDPDFHNFDLDRDENSFAEDQVWAAYDDDDGMPRYYARIHKVISMKPFKMRISWLNSRSNSELGPIDWVGSGFYKTCGDFRTGKHEITESLNSFSHKVRWTKGTRGVVRIFPGKGEVWALYRNWSRDWNEHTPDEVIHKYDMVEVLEDFNEEQGILVTPLVKVAGFRTVFQRHMDRDRERMIPKEEMFQFSHQVPNYLLTGQEADNAPKDCRELDPAATPLDLLQIITEANETSKNALEA* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1991 692 MobiDBLite consensus disorder prediction 133 179 - -
Gso4g1991 692 PRINTS DnaJ domain signature 69 87 IPR001623 -
Gso4g1991 692 PRINTS DnaJ domain signature 87 102 IPR001623 -
Gso4g1991 692 PRINTS DnaJ domain signature 103 123 IPR001623 -
Gso4g1991 692 SMART dnaj_3 66 123 IPR001623 -
Gso4g1991 692 CDD DnaJ 67 120 IPR001623 -
Gso4g1991 692 Gene3D DnaJ domain 64 175 IPR036869 -
Gso4g1991 692 MobiDBLite consensus disorder prediction 233 285 - -
Gso4g1991 692 SUPERFAMILY Chaperone J-domain 57 127 IPR036869 -
Gso4g1991 692 Pfam Domain of unknown function (DUF3444) 449 655 IPR024593 -
Gso4g1991 692 MobiDBLite consensus disorder prediction 232 303 - -
Gso4g1991 692 PANTHER HEAT SHOCK PROTEIN-LIKE 2 685 - -
Gso4g1991 692 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Gso4g1991 692 MobiDBLite consensus disorder prediction 133 176 - -
Gso4g1991 692 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Gso4g1991 692 PANTHER BNAC03G44070D PROTEIN 2 685 - -
Gso4g1991 692 MobiDBLite consensus disorder prediction 396 415 - -
Gso4g1991 692 Pfam DnaJ domain 67 128 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1991 Gso-Chr4 50230511 50235960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1991 5 226 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.174 7.54e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1991 - - gmx:100818585 1417.91