Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1979 ATGTATGCAGAGACTGGTCTTCTCTTCCCATATTTGAACAACATCTCTCACGGCCTTCATCAGCTCGAGGAGTACTGCAAAACCCAGAAGTCCAATGCTTCAATGGATGACCTTGTTCAGTCTTCTGTCATGTCAGAGTATGATTTGGCAGCAGAGGGAGATCTGTTCAAAGCTCCTGAACCTATTATTGAAGAGCCAATCATGGATATGGATCCCATGACAGCCACCATCTCCATGATATCTTGTGGGGAAGATGTCTCCTCACAGGGACTAAAATCCACTGATATTGATATTCTTCAAAATGATCAGTTTCTGCATGAGGTGTTCTATGAATGTGAAAAGGATCTCTTAGAAAAGGCAGCAATAGAGCCACCATTCTCTGAGATTCTGGAAATCAAGGTTCCTCTTCTGAACATTGATGAGAACACAATTCAAGAAAACAAGCTGCTTCCTGACATGCAATTAGCAAAGAGTGTCAGCTCAGGAAGTTTGAGCTCAATGGACTGGATGCGTGGAGCTGCAATGAAGCCTTCTTTCATTGATATCCCTGCAATAGATTTCAATGCAGATTATGGCATGCGGAGATCATTTAGCGAAGGAGATATAAAGACTCTTGGTAATGGTAACATGAACATCGTCCAATCACCCCTTGAGAGGCCCTTGCTTATCAGCAACTGCACCAGTGAGGAACGCTTTCAAAAGCTCTCAAGATACAGGAATAAGAGGACAAAGAGGAATTTTGGGAGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGTCAGCCAAGAATCCGTGGGAGATTTGCAAGGACTGAAGAGTCTGATGTCAAGAGGGAATGA 846 0.435 MYAETGLLFPYLNNISHGLHQLEEYCKTQKSNASMDDLVQSSVMSEYDLAAEGDLFKAPEPIIEEPIMDMDPMTATISMISCGEDVSSQGLKSTDIDILQNDQFLHEVFYECEKDLLEKAAIEPPFSEILEIKVPLLNIDENTIQENKLLPDMQLAKSVSSGSLSSMDWMRGAAMKPSFIDIPAIDFNADYGMRRSFSEGDIKTLGNGNMNIVQSPLERPLLISNCTSEERFQKLSRYRNKRTKRNFGRKIKYACRKALADSQPRIRGRFARTEESDVKRE* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1979 281 ProSiteProfiles CCT domain profile. 231 273 IPR010402 GO:0005515
Gso4g1979 281 Pfam CCT motif 231 273 IPR010402 GO:0005515
Gso4g1979 281 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 27 279 - -
Gso4g1979 281 PANTHER CCT MOTIF FAMILY PROTEIN 27 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1979 Gso-Chr4 50077844 50083066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1979 206 277 C2C2-CO-like Transcription Factor Family AT5G57660 39.189 2.36e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso4g1979 CCT 3.3e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1979 - - gmx:100814332 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1979 4 50077844 50083066 Gso6g1086 6 10584446 10589540 GST