Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1970 ATGGGGAAGAAAGGAGGGAGCTGGTTCTCGTCGGTGAAGAAAGTTTTCAAGTCCTCTTCTTCTAAGGACTCGCCGCTGCCGGAGAAGAAGAAAGAGAACAACAAGGAAGAACAGTGGCAGCATGTGGCGCCAGAGGAGGTTTCTGTGGAGCATTTTCCTGCAGAGAGTTCTCCAGATCTTACCAATGAAGGGAGTGTCACGTCGTCAACACCAGTGACTGAAGATACAAACCCTGCCGTTGCCTTTGCAGCAGCAACTGCCGCCGCCGCCGAAGCGGCCGTGGCGGCAGCTCAAGCAGCCGCTAGAGTTGTGAGGTTGGCGGGTTATGGACGCCAGTCCAAAGAAGAAAGAGCTGCAATACTCATTCAATCATACTACAGAGGCTACCTTGCTCGACGTGCATTGCGTGCTTTGAAGGGATTGGTGAGGCTGCAAGCGCTGGTGAGGGGACATAATGTGCGAAAGCAAGCGCAAATGACAATGAGATGCATGCATGCATTGGTCCGAGTGCAGACAAGAGTAAGAGCTCGCAGACTGGAGTTGACTGAGGAGAAGCTTCAGAGAAGAGTTTATGAGGAGAAGGTCCAAAGAGAAGTAGATGAACCTAAGCAGTTTTTGAGCCCCATCAAAATGTTAGATATGGATGGTTGGGACAGTAGGCGCCAAACTAGCCAGCAAATTAAGGATAATGATTTGAGGAAACATGAAGCTGTAATGAAAAGGGAGAGAGCTCTTGCTTACGCTTTCAACTGCCAGCAGCTGAAGCAACACATGCACATAGACCCAAATGGTGATGATATAGGAAGCTATAGCACTGAGCGTGAAAGAGCCCAATTGGATTGGAACTGGTTGGAACGTTGGATGTCATCACAATCACCCAACTTAAGACCACGTGAGACCCTTTATAGGACTCTTGCTACTGCTACTTCCACCACTGATGACATGTCTGAAGAAAAGACAGTTGAAATGGACATGGGTGCAACTCTGGACTCAACTCATGCTAATATGGGCTTCATTAATGGAGAATCTTTTGACACAAGCCCAATTTCTAATAGGTACCACCAGCGCCACCACAGTGCTGGTGTCCCTAGCTACATGGCCCCAACCCAGTCTGCAAAGGCCAAGGTTCGAAGTCAAGGCCCGTTTAAGCAACGTGGTTCACCTGGGCCTCACTGGAACTCATCCACAAGGAGAGGTTCTTCTGTTGGTTTGGGCTGTGACTCATCTAGCTCTGGTGGGCCCACTGCAGCCCATGTCTTCCCAAGAAGCCCAAACCCAAAAATTAACGAGATTCGCCTCCAATCTAGACGGATTTCAGGTGGCAGCCCAGATAATGTTCACATTGAGGATTGGGCCCTTCCCCTTGGAGCCACCAACGGTTGGGCTTGA 1389 0.4982 MGKKGGSWFSSVKKVFKSSSSKDSPLPEKKKENNKEEQWQHVAPEEVSVEHFPAESSPDLTNEGSVTSSTPVTEDTNPAVAFAAATAAAAEAAVAAAQAAARVVRLAGYGRQSKEERAAILIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMHALVRVQTRVRARRLELTEEKLQRRVYEEKVQREVDEPKQFLSPIKMLDMDGWDSRRQTSQQIKDNDLRKHEAVMKRERALAYAFNCQQLKQHMHIDPNGDDIGSYSTERERAQLDWNWLERWMSSQSPNLRPRETLYRTLATATSTTDDMSEEKTVEMDMGATLDSTHANMGFINGESFDTSPISNRYHQRHHSAGVPSYMAPTQSAKAKVRSQGPFKQRGSPGPHWNSSTRRGSSVGLGCDSSSSGGPTAAHVFPRSPNPKINEIRLQSRRISGGSPDNVHIEDWALPLGATNGWA* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1970 462 MobiDBLite consensus disorder prediction 378 426 - -
Gso4g1970 462 MobiDBLite consensus disorder prediction 1 74 - -
Gso4g1970 462 MobiDBLite consensus disorder prediction 23 44 - -
Gso4g1970 462 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Gso4g1970 462 Pfam IQ calmodulin-binding motif 142 157 IPR000048 GO:0005515
Gso4g1970 462 Pfam IQ calmodulin-binding motif 116 136 IPR000048 GO:0005515
Gso4g1970 462 Gene3D - 113 164 - -
Gso4g1970 462 SMART iq_5 114 136 IPR000048 GO:0005515
Gso4g1970 462 SMART iq_5 137 158 IPR000048 GO:0005515
Gso4g1970 462 ProSiteProfiles IQ motif profile. 139 166 IPR000048 GO:0005515
Gso4g1970 462 PANTHER IQ-DOMAIN 21 1 434 - -
Gso4g1970 462 MobiDBLite consensus disorder prediction 58 74 - -
Gso4g1970 462 Pfam Protein of unknown function (DUF4005) 347 400 IPR025064 -
Gso4g1970 462 PANTHER IQ-DOMAIN 5-RELATED 1 434 - -
Gso4g1970 462 MobiDBLite consensus disorder prediction 388 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1970 Gso-Chr4 49953036 49957788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1970 1 432 IQD Protein Family AT3G49260 49.565 1.20e-97 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1970 - - gmx:100808965 829.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1970 4 49953036 49957788 Gso6g1095 6 10699371 10704348 GST