Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1964 ATGGGCTTTGTCTTTGTCTCCGACCACGATATCGTTCCTCATACCTTCAACTCATCTTTTTCCTCTGCTCAAGTAAACCACACTCACAAAATAATGGAGATTTCACCATTGGAGGGTTTCTCCGAGCTTGATTGGCCATATTCAAGCAACCACCTTTGCTTCAATGAGTTTCCAGATTTAGAAAATCTGGACCTCGATTTCAGCCTCCCACCCCTTGGTGAATATTTGGAGGAGGAGCTGGACCAAAAGCCCTTGAACATTGTTGTTTCCCAAGGGGTCCATTGTAATCGGGAAAAGGGTTTTGGTGAAGCTTCTTCGTTCACGATTGAAAATGGGTCAGCCACTGCGAGTTATGTGCAGAATATTATTCATCAGAGGCCACAGCCGGTGTCTAGTAGCAGTAAGAAGAAGACATGTGTGTTAAAATTTGATGAGATAAGGAAGCATTTTGGTGTTCCTATAACTGAAGCTGCGAAGCGATTGAATGTGGGGCTAACCATGTTGAAGAGAAGGTGCAGGGAGCTCAACGTGAAGAGGTGGCCACATAGGAAACTCAAGAGCTTGCAATTACTCATCGACAATGTTAAGGAAATGGGTTTGGAAGACGAGGTTGCAAGGTTGGAGAAGCATAAAAGGTTGCTGGAAAAATTACCAGGAATGGAACTAAGTGAAGAAGCCAAGAAGCTGAGGCAAGCTTGCTTTAAAGCTAATTACAAGAAGAGAAGGTGCATGGCATCACTCCAAGCTTGA 750 0.4413 MGFVFVSDHDIVPHTFNSSFSSAQVNHTHKIMEISPLEGFSELDWPYSSNHLCFNEFPDLENLDLDFSLPPLGEYLEEELDQKPLNIVVSQGVHCNREKGFGEASSFTIENGSATASYVQNIIHQRPQPVSSSSKKKTCVLKFDEIRKHFGVPITEAAKRLNVGLTMLKRRCRELNVKRWPHRKLKSLQLLIDNVKEMGLEDEVARLEKHKRLLEKLPGMELSEEAKKLRQACFKANYKKRRCMASLQA* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1964 249 Pfam RWP-RK domain 141 188 IPR003035 -
Gso4g1964 249 Coils Coil 197 217 - -
Gso4g1964 249 ProSiteProfiles RWP-RK domain profile. 126 209 IPR003035 -
Gso4g1964 249 PANTHER PROTEIN RKD4 114 243 IPR044607 GO:0003700
Gso4g1964 249 PANTHER PROTEIN RKD4 114 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1964 Gso-Chr4 49908767 49910349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1964 141 245 AtRKD Transcription Factor Family AT5G53040 60.000 4.35e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Gso4g1964 RWP-RK 1.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1964 - - gmx:102670540 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1964 4 49908767 49910349 Gso6g1102 6 10759157 10760953 GST