Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1945 ATGGCAGCTTTTACATCAATTGTTGTGCAGTACTCATCCACATCATCTTTACAGTCTTTGGTACCTTCTTTAGAAGCTACACGCGATCATAATTCATGGTGGGGGAGAGTGAGATCATACAGATCCACAGGAAAAAATTCACTCCAACAGAATATCACAAGAGGCTTAACAATCCAAAATGCAGCCACAAAACCAGCTAAGTCACCAGCTGAAGAAGACTGGAAGGTTAAGCGAGAATATCTGCTGGAAAAAAGGGTAAGAAGTGTGGATGCAAAGGAAGCTTTCCGTCTTCAGAAAGAAAATAATTTTGTGATTCTCGACGTAAGGCCAGAAGCAGAGTTCAAAGAGGCTCATCCTCCAGATGCTATCAATGTGCAAATATATAGGCTTATAAAAGAGTGGACAGCATGGGACATTGCCAGACGTGCTGCATTTGCATTTTTTGGTATTTTTGCTGGGACTGAAGAGAATCCCGAGTTCATCCAGTCTGTTGAAGCAAAATTAGATAAAAATGCAAAGATAATAGTAGCTTGCTCAGCAGGGGGTACAATGAAACCATCACAAAATCTACCCGAAGGTCAACAATCAAGGTCTCTCATAGCAGCTTACTTGCTGGTCCTTGATGGTTATACCAATGTCTTCCATCTCGAAGGCGGCCTTTACTCATGGTTTAAAGAGGATCTGCCAAGTGTTTCAGAGGAATGA 705 0.4184 MAAFTSIVVQYSSTSSLQSLVPSLEATRDHNSWWGRVRSYRSTGKNSLQQNITRGLTIQNAATKPAKSPAEEDWKVKREYLLEKRVRSVDAKEAFRLQKENNFVILDVRPEAEFKEAHPPDAINVQIYRLIKEWTAWDIARRAAFAFFGIFAGTEENPEFIQSVEAKLDKNAKIIVACSAGGTMKPSQNLPEGQQSRSLIAAYLLVLDGYTNVFHLEGGLYSWFKEDLPSVSEE* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1945 234 Gene3D - 85 233 IPR036873 -
Gso4g1945 234 ProSiteProfiles Rhodanese domain profile. 99 232 IPR001763 -
Gso4g1945 234 CDD RHOD 93 223 - -
Gso4g1945 234 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 13 234 IPR043186 -
Gso4g1945 234 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC 13 234 - -
Gso4g1945 234 Pfam Rhodanese-like domain 92 224 IPR001763 -
Gso4g1945 234 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 83 229 IPR036873 -
Gso4g1945 234 SMART rhod_4 89 229 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1945 Gso-Chr4 49678946 49681332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1945 1 229 Sulfurtransferasese or Rhodanese AT4G27700 67.686 3.12e-106 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1945 - - gmx:100797443 446.432