Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1939 ATGGCTTCAGATCGGAAACTTCACACTTTCGAGGAGGTGGCAAAGCACGACCAGACCAAGGATTGCTGGCTCATCATTTCTGGCAAGGTGTATGATGTCACCCCTTTCATGGAGGATCATCCCGGAGGTGATGAGGTTTTGTTATCTGCAACAGGGAAAGATGCAACCAATGATTTTGAAGATGTTGGACACAGTGATTCTGCTAGAGATATGATGGAAAAATACTACATTGGTGAGATTGATTCATCAACTGTACCACTAAAACGTACCTACATTCCACCTCAGCAAGCTCAGTACAATCCTGACAAGACTCCAGAATTTGTGATCAAGATTTTGCAGTTCCTGGTCCCTCTCCTGATCTTGGGCTTGGCCTTTGTTGTGCGACACTACACCAAGAAAGAGTAG 405 0.4494 MASDRKLHTFEEVAKHDQTKDCWLIISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSARDMMEKYYIGEIDSSTVPLKRTYIPPQQAQYNPDKTPEFVIKILQFLVPLLILGLAFVVRHYTKKE* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1939 134 PANTHER CYTOCHROME B5 1 132 - -
Gso4g1939 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Gso4g1939 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Gso4g1939 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Gso4g1939 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Gso4g1939 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Gso4g1939 134 Gene3D - 1 86 IPR036400 -
Gso4g1939 134 PANTHER CYTOCHROME B5-LIKE 1 132 - -
Gso4g1939 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Gso4g1939 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Gso4g1939 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 90 IPR036400 -
Gso4g1939 134 SMART Cyt_b5_2 8 81 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1939 Gso-Chr4 49637650 49640651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1939 1 134 NADPH P450 reductases AT5G53560 82.090 3.58e-84 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1939 K23490 - gmx:100499823 277.33