Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1917 ATGCGTTGGGGACTAGCAAATGAGTTTATCCTTGTCTCATTCATTCCGGTTGGCATATTTTCAGCAGCAGCAAACATGGTGTTGGCACTTGCTTTGTCCGCAAACCGTTCATGTTTGTGTTCTTCTACCACCTTTCATCCACACCCACTATTAAATCCTTCACCCTCCCTCCATTTTTCACCTTCAACCTTCCATCCTCAACCCCTATGCTCCCTCATCAAACAATACATCATACCACAACCATCACACAAGGCCTCCATTCACCGCCGCCGCTGCAGTAACTCCCTCGCCACTTCCGACGCCCAATTCGCATCAATCATTGCTCTGTTTCAAGATATTGGAATCGGCTTTGAAGAGACCCAAGTCCTCTTGTGCAACAACCATGACCTAGCCTCTGTGCCAATTGACTCATTGCACGTTCGCTTTCTCTCTCTGCGCTCTCTTGGCTTCGACCCTCTCACTCTCTGCAAATTAGTCACAAAGCGCCCAACCATATTAACAGCCAACGAAATTGACCCTTTGTTAACCTTTCTGAGAGACAATTTGCAAGGAAAACTCGAGAAACAGCAACTCAATCGCCTCTTATCTTCTACGGAGCAAGAATTCTTGGAGAGTTTTCCTCAGAAGGTTCAATTCCTAGTTGACCGAGGAATCCCCGTTGACCAGGTTGTGCACGTGCTAAACAAAGTGAATTTGTCAAAGGTCTTGTGTCGTAGGTCGCTTGAAGAAATCGACAGAACCATATCTTTCTTAGAACCTTTTGGTGGCATTGCTTTGATTCTGAAACGTCCTCAAATTTTGAACCATGATTTGGATACTCAAATTGTTCCTAGAGTCAAATTTCTGATGGAGCTTAGTGATGGAGATGAAGATAGTGTTGGGAAAGTGCTGCTTAGGTTTCCCATATTCTTGAATTACAGTGTGGCACATGTGGAGGAACACGTAGGGTTTCTGAGTTCTTTTGCCGAGTTTGATTACAAACAGATATTTAGGATAATACAAGTTTACCCGGCTATTGTTACTACTAGCAGAGAGAGGAAACTGCGTCCTAGAATACAGTTTCTCAAGGAATGTGGGTTGGATTCTGATGAGATCTTCAAGTTCTTGATTAAAGGGCCCACGTTTCTGAGCATTTCATTCAATGAGAACATCGCTTATAAGCTGGTGTTGCTGGTGAAGATTGGCTATAGGTATAGGTCAAAGGACTTGGCAATGGCGATTAGGTCTGCTACTAGGACAAACTGTGGGAACATGCAGAAGGTCATTAGTTTGTTCTTGAATTATGGGTTTTCGTGTGAAGACATTGTTGCTATGAGCAAGAAGCAGCCACAGATACTGCAGTATAATCACACCTCTTTGGAGAAGAAGATGGAGTACTTGATAGAGGAGATGGGGCGGGACATTGAGGAGTTGCTGCTTTTTCCTGCATTTCTTGGGTACAAGCTTGATGATAGGATTAAGCATAGGTTTGAAGTCAAGAAGCTTGTTAGAGGCAGGGGAATGTCTATCAATAAGCTTTTAACTGTTTCTGAGGAGACATTTGCTGGCAAACGAAAAAAGGTCATGCCGTAG 1572 0.4377 MRWGLANEFILVSFIPVGIFSAAANMVLALALSANRSCLCSSTTFHPHPLLNPSPSLHFSPSTFHPQPLCSLIKQYIIPQPSHKASIHRRRCSNSLATSDAQFASIIALFQDIGIGFEETQVLLCNNHDLASVPIDSLHVRFLSLRSLGFDPLTLCKLVTKRPTILTANEIDPLLTFLRDNLQGKLEKQQLNRLLSSTEQEFLESFPQKVQFLVDRGIPVDQVVHVLNKVNLSKVLCRRSLEEIDRTISFLEPFGGIALILKRPQILNHDLDTQIVPRVKFLMELSDGDEDSVGKVLLRFPIFLNYSVAHVEEHVGFLSSFAEFDYKQIFRIIQVYPAIVTTSRERKLRPRIQFLKECGLDSDEIFKFLIKGPTFLSISFNENIAYKLVLLVKIGYRYRSKDLAMAIRSATRTNCGNMQKVISLFLNYGFSCEDIVAMSKKQPQILQYNHTSLEKKMEYLIEEMGRDIEELLLFPAFLGYKLDDRIKHRFEVKKLVRGRGMSINKLLTVSEETFAGKRKKVMP* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1917 523 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF8, CHLOROPLASTIC 110 520 - -
Gso4g1917 523 Gene3D Transcription termination factor 3, mitochondrial 86 287 IPR038538 -
Gso4g1917 523 Gene3D Transcription termination factor 3, mitochondrial 315 522 IPR038538 -
Gso4g1917 523 PANTHER CGI-12 PROTEIN-RELATED 110 520 IPR003690 GO:0003690|GO:0006355
Gso4g1917 523 Pfam mTERF 144 391 IPR003690 GO:0003690|GO:0006355
Gso4g1917 523 Pfam mTERF 351 515 IPR003690 GO:0003690|GO:0006355
Gso4g1917 523 SMART mt_12 436 467 IPR003690 GO:0003690|GO:0006355
Gso4g1917 523 SMART mt_12 294 325 IPR003690 GO:0003690|GO:0006355
Gso4g1917 523 SMART mt_12 330 361 IPR003690 GO:0003690|GO:0006355
Gso4g1917 523 SMART mt_12 366 397 IPR003690 GO:0003690|GO:0006355
Gso4g1917 523 SMART mt_12 257 288 IPR003690 GO:0003690|GO:0006355
Gso4g1917 523 SMART mt_12 468 500 IPR003690 GO:0003690|GO:0006355
Gso4g1917 523 SMART mt_12 156 185 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso4g1917 mTERF 5.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1917 - - gmx:100799904 1010.75