Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1907 ATGTCTCCAGGTCCCGTTGTCGACGCTTCCCCTGAGGTTGATGCAGAGCAACAACTTCCCTCCGTCGATGACGCCACTCAGAAGAAGATACCCCAACAGGAGGACGATGCTCCCCTTGTCGAGGACTTGAAGGATGATGACAAAGACGACGACGATGAAGACGACGACGACGACGACGACGAAGATGACAAGGAAGACGATGCTCAAGGTGGTGCTGAGGGTTCAAAGCAGAGCAGAAGTGAGAAGAAGAGCCGAAAAGCAATGTTGAAGCTGGGACTGAAACCTGTTACTGGTGTTAGTAGGGTCACAATCAAGAGAACAAAAAATATTCTTTTCTTCATCTCAAAACCCGATGTCTTCAAGAGTCCAAACTCTGAGACCTATGTCATATTTGGGGAGGCGAAAATAGAGGACTTGAGCTCTCAGTTGCAGACACAGGCTGCTCAACAGTTCAGGATGCCAGATATGGGATCTGTAACGGCAAAACAAGAAGATGCTGCAGCTGCAGCAGCGCAACCTGAAGAAGAGGAGGAGGTTGATGAAACTGGTGTCGAGCCCCATGACATTGATTTGGTGATGACACAGGCAGGAGTGTCAAGAAGCAAGGCTGTCAAGGCTCTCAAGACTCACAACGGGGACATTGTTGGAGCCATCATGGAACTCACTACTTAA 672 0.4926 MSPGPVVDASPEVDAEQQLPSVDDATQKKIPQQEDDAPLVEDLKDDDKDDDDEDDDDDDDEDDKEDDAQGGAEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSVTAKQEDAAAAAAQPEEEEEVDETGVEPHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1907 223 MobiDBLite consensus disorder prediction 69 87 - -
Gso4g1907 223 MobiDBLite consensus disorder prediction 39 68 - -
Gso4g1907 223 CDD UBA_NAC_euk 186 222 - -
Gso4g1907 223 Gene3D - 87 140 IPR038187 -
Gso4g1907 223 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 17 222 IPR016641 GO:0005854
Gso4g1907 223 SMART NAC_2 81 137 IPR002715 -
Gso4g1907 223 ProSiteProfiles NAC A/B domain profile. 78 143 IPR002715 -
Gso4g1907 223 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2 17 222 - -
Gso4g1907 223 MobiDBLite consensus disorder prediction 1 87 - -
Gso4g1907 223 Pfam NAC domain 81 136 IPR002715 -
Gso4g1907 223 Pfam HYPK UBA domain 183 222 IPR044034 -
Gso4g1907 223 Gene3D - 184 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1907 Gso-Chr4 49282378 49284858 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1907 K03626 - gmx:100780632 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1907 4 49282378 49284858 Gso6g0837 6 7968626 7970400 GST
Gso4g1907 4 49282378 49284858 Gso6g1161 6 11333614 11336249 GST
Gso14g1501 14 46296833 46298570 Gso4g1907 4 49282378 49284858 PCT
Gso2g1795 2 41717415 41719315 Gso4g1907 4 49282378 49284858 PCT
Gso4g1907 4 49282378 49284858 Gso14g1501 14 46296833 46298570 PCT
Gso4g1907 4 49282378 49284858 Gso2g1795 2 41717415 41719315 PCT