Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1905 ATGCAAAACAATCTTTCAGAGAAAATGAAGCCAAATAAGCTTAAATGTATAACTACATTTTTTATCCTATATTTGTTCAATCAAAATGCTCATTCTGAGCTGCAGGTTGGGTATTACAGCTATTCATGTAGCATGGCTGAGTTCATTGTGAAGGATGAAGTCAGAAAAGGTGTTACTAATAATCCTGGAATTGCAGCTGGGCTTGTAAGAATGCATTTTCATGATTGCTTTATTAGAGGGTGTGATGCATCAGTGCTTCTTGATTCCACTCCCTTAAACACTGCAGAGAAAGACTCTCCCGCAAATAAACCAAGTCTCCGAGGATATGAAGTCATTGATAATGCCAAGGCTAAACTAGAAGCAGTATGCCCAGGAATTGTTTCATGCGCTGACATTGTTGCATTTGCAGCAAGGGACAGTGTGGAGTTTGCTCGAGGGCTTGGTTATGATGTTCCAGCAGGAAGAAGAGATGGCAGAATCTCACTAGCTTCAGATACAAGAACAGAGTTACCTCCTCCAACTTTCAATGTAAACCAACTCACTCAACTCTTTGCAAGAAAGGGATTAACACAAGATGAAATGGTCACCCTTTCAGGAGCACACACCATCGGTCGCTCTCATTGCTCGGCTTTCAGCAGCAGATTATACAACTTCAGTACCACTTCAAGCCAGGATCCAAGTTTAGATCCCTCATATGCAGCACTTCTGAAGCGGCAATGTCCACAAGGCAGCACGAACCAAAACTTGGTGGTTCCAATGGACCCTTCAAGTCCTGGAATTGCTGATGTGGGGTACTATGTTGATATATTAGCAAACCGAGGCCTCTTCACATCTGACCAAACTCTCTTAACTAATGCTGAAACAGCCAGCCAGGTGAAACAAAATGCCAGGGATCCCTATTTATGGGCAAGTCAATTTGCAGATGCAATGGTGAAGATGGGTCAAATCATTGTCTTAAAAGGTAATGCTGGAGAGATTAGAACAAATTGCAGGGTGGTCAATAGTTAG 1008 0.4236 MQNNLSEKMKPNKLKCITTFFILYLFNQNAHSELQVGYYSYSCSMAEFIVKDEVRKGVTNNPGIAAGLVRMHFHDCFIRGCDASVLLDSTPLNTAEKDSPANKPSLRGYEVIDNAKAKLEAVCPGIVSCADIVAFAARDSVEFARGLGYDVPAGRRDGRISLASDTRTELPPPTFNVNQLTQLFARKGLTQDEMVTLSGAHTIGRSHCSAFSSRLYNFSTTSSQDPSLDPSYAALLKRQCPQGSTNQNLVVPMDPSSPGIADVGYYVDILANRGLFTSDQTLLTNAETASQVKQNARDPYLWASQFADAMVKMGQIIVLKGNAGEIRTNCRVVNS* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1905 335 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso4g1905 335 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso4g1905 335 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso4g1905 335 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso4g1905 335 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso4g1905 335 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso4g1905 335 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso4g1905 335 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso4g1905 335 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso4g1905 335 PANTHER PEROXIDASE 25-RELATED 20 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso4g1905 335 ProSiteProfiles Plant heme peroxidase family profile. 33 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso4g1905 335 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso4g1905 335 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso4g1905 335 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso4g1905 335 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso4g1905 335 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso4g1905 335 Gene3D - 37 334 - -
Gso4g1905 335 CDD secretory_peroxidase 33 333 IPR033905 GO:0004601|GO:0042744
Gso4g1905 335 SUPERFAMILY Heme-dependent peroxidases 33 334 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso4g1905 335 PANTHER PEROXIDASE 20 331 - -
Gso4g1905 335 Pfam Peroxidase 50 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso4g1905 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Gso4g1905 335 Gene3D Peroxidase, domain 2 171 313 - -
Gso4g1905 335 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1905 Gso-Chr4 49277708 49279361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1905 19 335 Peroxidase AT1G05260 49.530 1.39e-99 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1905 K00430 - gmx:100779031 655.981