Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1901 ATGATATCTTTGTTTCTAGTTTTGTGTAATCAGAGATGCCATCTTAAAGCTAAGGATATCAGGAAGAAGTTCCTCGAGGGCGTTTCCGTTCGATCTGAAAAAGTGAAGGATGAGTTGGTTTTGGATGGAAACCACAATGAGCTTGTTTCTAGGTCTTGGGCTCTCATTAATCAGCTTAAAAATAAGGATATCAGGGAGTTCTTTGATGGTATGGTATTTATGTCAGCGAGCGAAGGGAGCAATATCAGAGAAGAGTAG 258 0.3992 MISLFLVLCNQRCHLKAKDIRKKFLEGVSVRSEKVKDELVLDGNHNELVSRSWALINQLKNKDIREFFDGMVFMSASEGSNIREE* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1901 85 Gene3D - 23 84 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Gso4g1901 85 PANTHER 60S/50S RIBOSOMAL PROTEIN L6/L9 6 30 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Gso4g1901 85 PANTHER 60S/50S RIBOSOMAL PROTEIN L6/L9 25 72 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Gso4g1901 85 SUPERFAMILY Ribosomal protein L6 20 73 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Gso4g1901 85 PANTHER RIBOSOMAL PROTEIN L6-RELATED 6 30 - -
Gso4g1901 85 PANTHER RIBOSOMAL PROTEIN L6-RELATED 25 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1901 Gso-Chr4 49239666 49240461 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1901 12 85 Cytoplasmic Ribosomal Protein Gene Family AT1G33140 59.494 2.31e-16 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1901 K02940 - gmx:121174804 140.584