Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1884 ATGGAGGAGTTTTTTCTGGCAATGAAACTGGTTTTTTCAGTTGCTGTTGTGGGGATTCTAAGCTGGATTCTTTCTGTGTATGGTAATTTGTGGCATGAGTCTCAAAGGTTGAGGAAGAGGCTACAAATGCAAGGTATAAAAGGGCCTCCACCTTCTTTTCTACATGGGAATCTGCCTGATATGCAAAGAATTCAATCTCAGGCCAAAGCTGCTTCCACTTGCAACTCCGACCTTTCTGATCAGTTTCTAGCACATGACTACACTGCAACCCTCTTCCCCTATTTTGAACACTGGAGGAAACAATATGGTCTACTGTACACTTACTCCACAGGGATGAAGCAACACCTGTATGTGAACCAACCAGATCTAGTGAGAGAAATGAATCAGTGCATCACTTTGGATTTGGGTAAGCCTACTTATATAACAAACAAACTTGCTCCTATGCTTGGCAATGGCATTTTGAGAGCCAACGGGCTCAGTTGGGCCCAACAGAGGAAACTTGTTGCAGCTGAGTTCTTCATGGACAAAGTTAAGGGTATGGTGGGCCTAATGATAGAGTCAGCACAGCCATTACTACTAAAATGGGAGCAATTTATTGAGAGCCAAGGAAGTGCCACAGCTGAAGTTAAAGTGGATGTAGATTTGAGGGGCTTCTCAGCTGATGTTATTTCAAGGGTTTGCTTTGGCCATTCTTATTCCAAGGGAAAAGAAGTCTTCTCAAAGCTTAGAAGCATACAGAAGGCCATGTCCAAGCATGGTGGCTTCCTTTTTGGGCTCAGCAGTTTCCGTGACAAACTGAAGCATTTGTCGTCAAAGAAGCAAAACGAGATAGCAAGTTTGGAGAAAGAGATAGAGTCACTGATCTGGGAGTTGGTGGAGGAACGCAAGAGGGAGTGCTCAGGGACATCCTCATCAGAGAAGGATTTGATGCAGTTGCTGTTGGAAGCAGCAATGACTGATCAGAGTCTGGGGAAGGACTTCTCCAAGCGTTTCATTGTGGATAACTGCAAAAACATTTACTTTGCTGGCCATGAAACCACAGCTGTTGCAGCCTCTTGGTGTCTGATGCTTCTTGCTTTGCACCCTGAATGGCAGACCCGTATAAGGACTGAGGTGGCTGAACTTTGCCCCAATGGTGTACCAGATGCAGATTCTGTCCCTCTGTTGAAAACGGTGGCTATGGTGATTAAAGAAGTGCTACGTTTATACCCACCAGCAGCCTTTGTTTCAAGGGAGGCATATGAAGATATCCAAATTGGAAACCTCAATGTTCCTAAAGGCGTTTGTTTATGGACTCTGATCCCAACACTGCATAGAGATCCTGAAATTTGGGGACCAGATGCAAATGAGTTTAAACCAGAAAGGTTTAGCGAGGGTGTCTCCAAGGCTTGCAGGTTTCCACATGCTTATGTGCCATTTGGATTGGGTACCCGCTTGTGCTTGGGAAAGAACTTTGCAATGGTTCAATTGAAGGTTGTGCTAGCACTTATCATCTCCAAGTTTAGCTTCTCTTTGTCTCCTAGTTATAGGCATTCTCCGGCATATAGAATGATTGTAGAACCGGGACATGGTGTACATATTCTCATTCAGGAGATTTGA 1599 0.4453 MEEFFLAMKLVFSVAVVGILSWILSVYGNLWHESQRLRKRLQMQGIKGPPPSFLHGNLPDMQRIQSQAKAASTCNSDLSDQFLAHDYTATLFPYFEHWRKQYGLLYTYSTGMKQHLYVNQPDLVREMNQCITLDLGKPTYITNKLAPMLGNGILRANGLSWAQQRKLVAAEFFMDKVKGMVGLMIESAQPLLLKWEQFIESQGSATAEVKVDVDLRGFSADVISRVCFGHSYSKGKEVFSKLRSIQKAMSKHGGFLFGLSSFRDKLKHLSSKKQNEIASLEKEIESLIWELVEERKRECSGTSSSEKDLMQLLLEAAMTDQSLGKDFSKRFIVDNCKNIYFAGHETTAVAASWCLMLLALHPEWQTRIRTEVAELCPNGVPDADSVPLLKTVAMVIKEVLRLYPPAAFVSREAYEDIQIGNLNVPKGVCLWTLIPTLHRDPEIWGPDANEFKPERFSEGVSKACRFPHAYVPFGLGTRLCLGKNFAMVQLKVVLALIISKFSFSLSPSYRHSPAYRMIVEPGHGVHILIQEI* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1884 532 Gene3D Cytochrome P450 30 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1884 532 PANTHER CYTOCHROME P450 FAMILY MEMBER 7 527 - -
Gso4g1884 532 PRINTS P450 superfamily signature 342 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1884 532 PRINTS P450 superfamily signature 394 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1884 532 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1884 532 PRINTS P450 superfamily signature 480 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1884 532 PRINTS E-class P450 group I signature 99 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1884 532 PRINTS E-class P450 group I signature 218 236 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1884 532 PRINTS E-class P450 group I signature 331 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1884 532 PRINTS E-class P450 group I signature 351 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1884 532 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1884 532 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1884 532 PANTHER CYTOCHROME P450 714A1-RELATED 7 527 - -
Gso4g1884 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
Gso4g1884 532 Pfam Cytochrome P450 89 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1884 532 SUPERFAMILY Cytochrome P450 86 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1884 532 Coils Coil 263 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1884 Gso-Chr4 49088176 49095792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1884 123 529 Cytochrome P450 AT5G24900 57.282 8.09e-178 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1884 K20661 - gmx:100818766 1065.83