Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1883 ATGGTGACAATAATGAGAGTCGCAGCACAAACCCAGACACAGTTACAGTTGAAGAAACACATGATAGAGGGTTTCGGTTCCAAATACATGGAATTAAAATGGGTAAGGCGAAGAACAAGCAAAAGCTCTCAGCTCGAGAAGACGAAGAAGCTATCATCAAAACCACCTTTCCCAATTTACATTTCCACCGACCCACGCCATGTGGACCCGCACCGTCTCCGAGACCTCTTCGCTGATTGCAACCACTCTACCCACCGATTCCCTACCCGACCCGAACCCGTGGATATCCGCAAGCTCCGCACTGCACTGTCTCATAGTGCCGTTCTTGTCTCCGTCTTCTACAACCCCCAACATGTAAACGCCGTTTTCCATCAGAATTCATCGTCGTCTTCAATCGCGGATATTTTCATGCCGGTTTCTCCTTCACGCGATCAATTGGTCGGGTTTGGCCGCGCCGTTTCCGATTATGGCCTCACCGCTTCTATTTACGATGTCATGGTTATTCCTTCCCTGCAGAGAATGGGAATTGGTCAGATGATAGTTAAAAAAATTGTTAGAATGCTTACAAATAGAGACATCTATGACATAGCAGCCCTTTGTTCGGGGAATGAAAGGTTATTTTTTGAGGCGTGTGGATTTGGCAATGACATTTTGGGCTCTACTACCATGATGTACAGGAGAACTGCTCCATTAACAATCCAGGAAGGTGAATAG 714 0.4664 MVTIMRVAAQTQTQLQLKKHMIEGFGSKYMELKWVRRRTSKSSQLEKTKKLSSKPPFPIYISTDPRHVDPHRLRDLFADCNHSTHRFPTRPEPVDIRKLRTALSHSAVLVSVFYNPQHVNAVFHQNSSSSSIADIFMPVSPSRDQLVGFGRAVSDYGLTASIYDVMVIPSLQRMGIGQMIVKKIVRMLTNRDIYDIAALCSGNERLFFEACGFGNDILGSTTMMYRRTAPLTIQEGE* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1883 237 Pfam Acetyltransferase (GNAT) family 142 213 IPR000182 GO:0016407
Gso4g1883 237 CDD NAT_SF 144 193 - -
Gso4g1883 237 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 27 236 IPR039143 GO:0004343|GO:0006048
Gso4g1883 237 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 112 213 IPR016181 -
Gso4g1883 237 Gene3D - 57 216 - -
Gso4g1883 237 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 94 237 IPR000182 GO:0016407
Gso4g1883 237 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 27 236 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso4g1883 Acetyltransf_1 2.4e-07 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1883 - - gmx:100792685 475.322