Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1869 ATGGAAGAGGTAATAAATTCGATTCGACGCGCTTGTGTACTGGCCCAAAACCTTGAACAAGACCTACCCAACTTGGCGAACCAACCAGCTATGCTGTCCTTGTCCATTGATCAGATAACTGAGGCTTTCAGTGGTGCCAAGGAAAAGATGTTATTATTCTCCCGACAGAACCAAACCTCGGACGAATCTCCTCCGACGTTGGTTCATGAAACGACCACACAGCAGTCTCAGATGGATGCTAGTCTAATGCAGGAATGGCTAAGGTCTAGTCATGCACTGACAATGGATCAGTTGTTTCAAATGCATCAGTTTCATGCTGCAAGGAGCACGCTGCAGCAGATTGGTGAAATGGGAGGGAAAGATGGGGAAGATTCTGAGAGAAACAAGGGATCTGAAGGGGAAGTGCAGGGAATCCACGCGTCACCCTCGCGGCCACGAAAAAGAAGCAGGGAAGCTAATCAAGAGAAGAGAAAAGTGATGGTTCCTGCCCCACAGTTTGGAAACACGGAGGTGCCACCAGAGGATGGCTACACTTGGAGGAAATATGGCCAGAAAGAAATACTTGGCTCCAAGTACCCAAGGAGTTACTACAGGTGCACACACCAAAAGTTATATGAATGCCAAGCCAAGAAGCAAGTGCAAAGACTTGATCACAACCCTAACATATTCGAAGTAACATATAGAGGAAACCACACATGCCACATGTCCTCCACAGCACCATCATCAGTTCCACCACAACAACTACTGGTGGACATATCACAAAATAATAGTAGCACCATTTCCTCTCAGTTGTCTCCTACAATGAACCTCAGCCTCCACCCTGGTGGCGGAGGCGCCGCCAGCAGTGGCAGTGGTGGAGCCTCCACTTCAAGATACGGTGGTGATTATCCTGTGGTGGATATGGCTGATGCTATGTTCAACTCTGGTAGCAGCAGTGGTAACAACAGCATGGAATTTCTCTTCTCTCCCGCTGAGATAAAAGTGATCCAAAAATTGAATAGAACAAGAGATGAAGATTAG 1020 0.4735 MEEVINSIRRACVLAQNLEQDLPNLANQPAMLSLSIDQITEAFSGAKEKMLLFSRQNQTSDESPPTLVHETTTQQSQMDASLMQEWLRSSHALTMDQLFQMHQFHAARSTLQQIGEMGGKDGEDSERNKGSEGEVQGIHASPSRPRKRSREANQEKRKVMVPAPQFGNTEVPPEDGYTWRKYGQKEILGSKYPRSYYRCTHQKLYECQAKKQVQRLDHNPNIFEVTYRGNHTCHMSSTAPSSVPPQQLLVDISQNNSSTISSQLSPTMNLSLHPGGGGAASSGSGGASTSRYGGDYPVVDMADAMFNSGSSSGNNSMEFLFSPAEIKVIQKLNRTRDED* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1869 339 MobiDBLite consensus disorder prediction 119 133 - -
Gso4g1869 339 SUPERFAMILY WRKY DNA-binding domain 170 235 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso4g1869 339 MobiDBLite consensus disorder prediction 116 158 - -
Gso4g1869 339 Pfam WRKY DNA -binding domain 174 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso4g1869 339 PANTHER WRKY TRANSCRIPTION FACTOR 55 1 269 - -
Gso4g1869 339 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 269 IPR044810 GO:0003700
Gso4g1869 339 SMART WRKY_cls 173 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso4g1869 339 Gene3D WRKY domain 163 236 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso4g1869 339 ProSiteProfiles WRKY domain profile. 174 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso4g1869 339 MobiDBLite consensus disorder prediction 259 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1869 Gso-Chr4 48958612 48962899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1869 1 321 WRKY Transcription Factor Family AT2G40740 40.854 2.31e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso4g1869 WRKY 1.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1869 - - gsj:114410180 642.499