Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1856 ATGGTGGCTGAAATTATTGATCTTTCAGACTCCCCTCCATCATCACCCAGTTCATCTCATAATACTGCAGCAAGAATTCTCAATTTTGATTCTGTTTCTAATGGAAAAATTCAATTTGAGAAAGTTATTCCTATATCCTTAATGGCTTGCACAAATACCAACCAGCCCCAAAGTACTCTATGGGCAGCTTCAGGACATACCAATGAGCACTCTCAGATTGCTACTGCATTCCAACCCAGTATGCAACAAAGGGTTGCTACAGTACTTGAACCAGTACCTGAATCAATCACATGCATGTTTCCTCATGGAGCTAGACTCAAGGAGCCCTGGACTCACAGAGAACATGAGCTATTTTTTGTGGGGCTAATCAAGTATGGAAGAGGTCACTGGAGCAAAATTGCTAGACAGTTTTTGTTGAATAAGACACCACATCAAGTTCAGAGCTATGGTGCTAGCTTCTTCAGGCACCTACCATCTACACACCTACATGATTTTAGGAGAAGGAAGCCAACCTACTCAACATCTAGCCTCATGCCCAAAAACAACAATCTTATGGCTGCATCTGTCTCCATGCCTATGATTGTTAATGAGCTACAACAACAAACTCACATGCTTTTCCCGGAGAATGCTCCTTTCCTTCTGGCCCCATCACATGGAGAAGCAAGTAGCAGCAACAACACCACCATGTATGGGTTCCAGATGCAAACAGGTGGTGCAAGAACATCCATGAATGCTAGTGCTAATGGAGAAGTTGATTTGGAACTGCGTTTGGGTTGA 777 0.4311 MVAEIIDLSDSPPSSPSSSHNTAARILNFDSVSNGKIQFEKVIPISLMACTNTNQPQSTLWAASGHTNEHSQIATAFQPSMQQRVATVLEPVPESITCMFPHGARLKEPWTHREHELFFVGLIKYGRGHWSKIARQFLLNKTPHQVQSYGASFFRHLPSTHLHDFRRRKPTYSTSSLMPKNNNLMAASVSMPMIVNELQQQTHMLFPENAPFLLAPSHGEASSSNNTTMYGFQMQTGGARTSMNASANGEVDLELRLG* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1856 258 Pfam Myb-like DNA-binding domain 107 149 IPR001005 -
Gso4g1856 258 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 20 258 - -
Gso4g1856 258 SUPERFAMILY Homeodomain-like 109 157 IPR009057 -
Gso4g1856 258 SMART sant 106 156 IPR001005 -
Gso4g1856 258 ProSiteProfiles SANT domain profile. 105 158 IPR017884 -
Gso4g1856 258 MobiDBLite consensus disorder prediction 1 21 - -
Gso4g1856 258 PANTHER MYB-LIKE DNA-BINDING DOMAIN PROTEIN 20 258 - -
Gso4g1856 258 CDD SANT 109 149 IPR001005 -
Gso4g1856 258 Gene3D - 108 158 - -
Gso4g1856 258 ProSiteProfiles Myb-like domain profile. 107 154 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1856 Gso-Chr4 48830064 48831830 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso4g1856 Myb_DNA-binding 4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1856 - - gmx:102665898 498.819