Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1854 ATGGATCTTGAATCCAGCAAGTGTTGGGACACCTCAAAGGACTCTTGGAAGACAATTCTGCTCTTGGCCTACCAAAGCCTTGGTGTGGTATATGGGGACTTGAGCATTTCTCCATTGTATGTTTACACCAGCACATTTGCTGAAGATATTGAACATTCAGAGACCAATGAAGAGATTTTTGGTGCCCTTTCTTTTGTCTTCTGGACTCTGACACTGGTGCCGCTCTTCAAGTACGTTTTTGTGGTTCTTCGAGCTGATGATAATGGAGAGGGAGGTACTTTTGCTCTATATTCCTTGATCTGTAGGCATGCTAAAGTTAGTCTCCTTCCAAATCGACAACATGCGGATGAAGCGCTCTCTACATATAAGATGGAGGAGGCTCCGGAGAAAGATACTTCTAAAGTGAAGATGGTGCTTGAGAAATATAAGGGCTTGCATACAGCTCTCCTAATTGTGGTTCTACTTGGCACTTGTATGGTAATAGGGGATGGACTACTTACCCCAGCTATTTCTGTTTTCTCGGCAGTATCTGGTCTTGAGGTATCTATGTCCAAGAAACACCACCAGTATGCTGTGATTCCCATCACTTGCTTCATACTGGTGTGTTTGTTTGCACTGCAACACTATGGTACACATAGGGTGGGATTCCTTTTTGCTCCAATTGTGTTGGCATGGCTGTTGTGCATCAGCACACTTGGTTTATATAATATATTCAAATGGAATCCACATGTATATAAAGCTCTTTCACCATATTATATGTTCAAGTTCTTGAAGAAGACAAGGATAAGTGGATGGATGTCTTTGGGTGGAATATTACTGTGCATAACAGGCTCAGAAGCTATGTTTGCTGATCTTGGCCATTTCTCATATATGGCCATTCAGATTGCATTCACCTTTCTGGTGTATCCTGCGCTTATATTGGCATATATGGGTCAAGCTGCTTATTTGTCACATCATCATGATTCCGAACTCCAAATAAGTTTCTATGTCTCAGTTCCAGAAAGTGTGAGGTGGCCGGTGCTTATCTTAGCTATTCTAGCTTCTGTTGTGGGAAGCCAAGCAATCATCAGTGGAACATTTTCTATCATAAACCAGAGCCAATCTCTGGGTTGCTTCCCAAGAGTTAAGGTTGTTCATACATCTGACAAGATACATGGTCAGGTCTACATCCCTGAAATTAATTGGTTACTCATGATCCTCTGCATTGCTGTGACCATTGGATTTAGGGACACAAAACACATGGGAAATGCTTCAGGGTTAGCAGTGATGACCGTGATGCTGGTGACAACATGCCTTACTTCCTTAGTAATCGTAGTTTGTTGGCATAAACCCCCTATTATAGCCCTTTGCTTCCTGTTGTTCTTTGGCTTTATTGAGCTGCTGTATTTCTCAGCTTCACTGACAAAATTTTGTGAGGGTGCCTGGTTACCTATTCTGCTGGCCCTATTCCTCATGATTATAATGTACCTTTGGCACTATGCAACCATCAGAAAATATGAATATGACCTTCACAACAAGGTATCACTAGATTGGCTTCTTGCCTTGGGTCCAAGCTTGGGAATTGCTAGAGTCCCTGGAATAGGCCTAGTGTTCACTGACCTCACCACTGGCATCCCTGCAAACTTCTCCCGCTTTGTCACCAACCTTCCTGCATATCACCGCATCCTTGTTTTTGTTTGTGTGAAATCAGTGCCTGTCCCTCACGTCCCTGCTGCTGAGAGGTATCTAGTAGGCCGTGTAGGACCACCTGCTCATCGGTCCTACCGGTGCATAGTCAGATATGGATATCGCGATGTGCATCAAGATATTGATTCCTTTGAGTCTGAACTAGTAGCAAGGCTTGCTGATTTCATCCAATATGATTGGTACCGATCTAGGAGGAGTAGCATGAGCATTGACGATGATGCCTCAAACTCCAATGAATCATCAAGTTACAGATTAACCGTAATTGGAACAACTGGTTTCACTATCCAACCAGGATATGAAAGTGGTGGGGAGAGTATGCAGCAAGCAAGTGTATCTGTTGGTTTCCCCTCTGTACAAAGTGTGACTGATGTTATTGAGATGGAACCGGTTGTGACTGAGAGGAGAGTGAGGTTTGCAATTGATGATGAGCCTGAGAGTGATGCAAGGTCTGAGGCAGGAGTGCAAATGCAGGAAGAGTTAGAAGATCTTTATGCTGCACAAGAAGCTGGGATTGCCTTCATTCTTGGACATTCTCATGTAAGAGCAAAGCAAGGCTCATCTGTACTAAAGAAATTGGCACTTAACTATGGCTACAATTTCTTGAGAAGGAATTGTAGAGGCCCTGATGTGGCACTTAAGGTTCCCCCAGTTTCTCTTTTGGAGGTTGGCATGGTCTATATTGTGTAG 2373 0.4349 MDLESSKCWDTSKDSWKTILLLAYQSLGVVYGDLSISPLYVYTSTFAEDIEHSETNEEIFGALSFVFWTLTLVPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNRQHADEALSTYKMEEAPEKDTSKVKMVLEKYKGLHTALLIVVLLGTCMVIGDGLLTPAISVFSAVSGLEVSMSKKHHQYAVIPITCFILVCLFALQHYGTHRVGFLFAPIVLAWLLCISTLGLYNIFKWNPHVYKALSPYYMFKFLKKTRISGWMSLGGILLCITGSEAMFADLGHFSYMAIQIAFTFLVYPALILAYMGQAAYLSHHHDSELQISFYVSVPESVRWPVLILAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQVYIPEINWLLMILCIAVTIGFRDTKHMGNASGLAVMTVMLVTTCLTSLVIVVCWHKPPIIALCFLLFFGFIELLYFSASLTKFCEGAWLPILLALFLMIIMYLWHYATIRKYEYDLHNKVSLDWLLALGPSLGIARVPGIGLVFTDLTTGIPANFSRFVTNLPAYHRILVFVCVKSVPVPHVPAAERYLVGRVGPPAHRSYRCIVRYGYRDVHQDIDSFESELVARLADFIQYDWYRSRRSSMSIDDDASNSNESSSYRLTVIGTTGFTIQPGYESGGESMQQASVSVGFPSVQSVTDVIEMEPVVTERRVRFAIDDEPESDARSEAGVQMQEELEDLYAAQEAGIAFILGHSHVRAKQGSSVLKKLALNYGYNFLRRNCRGPDVALKVPPVSLLEVGMVYIV* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1854 790 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gso4g1854 790 Pfam K+ potassium transporter 24 598 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gso4g1854 790 PANTHER POTASSIUM TRANSPORTER 2 1 790 - -
Gso4g1854 790 TIGRFAM kup: potassium uptake protein 22 789 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1854 Gso-Chr4 48822251 48827005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1854 1 790 Inorganic Solute Cotransporters AT2G40540 77.363 0.0 1266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1854 K03549 - gmx:100806122 1561.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1854 4 48822251 48827005 Gso6g1214 6 11785498 11790369 GST