Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1843 ATGAATTCCCCACCCAAGTTGTTGTTGCTGTCTCTTCTCTTTCTCACTCTCTTCACTCTTTCTTCCTCCTCCTCCCTCCCGGAGCTCCGATCTCTCCTCGAATTCAAGAAAGGCATAACCCGAGATCCGGAGAAGCTTCTAGACTCATGGGCCCCCACCACCGTCGCCGAGTCCACCGCCACGTGTCCTTCCTCCTGGCAGGGCGTGGTCTGCGACGAGGAGTCCGGCAACGTCACTGGAATCGTCCTCGACCGCCTCAACCTCGGCGGCGAGCTCAAGTTCCACACTCTCCTCAACCTCAAGATGCTCAGAAACCTCTCGCTCTCCGGCAACGACTTCACCGGCCGCCTACCGCCGTCGCTGGGATCACTTTCGTCACTCCAGCATTTGGATCTTTCGCAGAACAAGTTCTACGGCCCCATCCCGGCGCGGATCAACGACCTTTGGGGCCTCAATTACCTCAATTTGTCCAACAACAACTTCAAGGGCGGCTTCCCCAGCGGCCTCAGCAACCTCCAGCAGCTGCGTGTTCTCGATTTGCATGCAAACCATCTCTGGGCCGAAATTGGGGACGTGCTCTCCACGCTCCGGAACGTGGAGCGCGTGGATTTGAGCCTCAACCGGTTCTTTGGCGGCCTCTCCCTCGCCGTTGAGAATGTTTCCTCCCTGGCGAACACCGTGCATTTTCTTAACCTGAGTTGCAACAACTTGAACGGTCGTTTCTTTACAAACTCCACCATTGGCCTTTTTCGTAATTTGCAGGTTTTGGACTTGAGTGATAACTCCATCACTGGGCAGCTTCCTTCTTTTGGCTCCTTGCCCGCGCTTCGTCTTCTCAGGCTTCCTCGGAATCAGTTGTTTGGTTCCGTGCCGGAGGAGCTGTTGCAGACTTCAGTGCCGCTGGAAGAATTGGATCTTAGCTTCAATGGGTTTACTGGCTCAATCGGTGTAATCAACTCTACAACTTTAAATTTTTTGAATCTTTCATCCAATAGTTTATCAGGCTCCTTGCCAACTTCTTTGAGAAGATGTACAGTCATTGACTTGAGCAGGAATATGTTATCTGGTGACATTTCTGTTATACAGAACTGGGAAGCCCCGTTGGAGGTCATTGATCTGAGTTCAAACAAGCTGTCAGGATCCCTGCCTTCTATTTTAGGAACCTATTCAAAATTGTCTACCATTGACTTAAGTTTAAATGAACTCAAGGGATCCATTCCACGAGGTTTAGTCACTTCATCGTCAGTGACAAGACTAAATCTTTCTGGAAATCAATTTACAGGGCCACTTCTGCTTCAAGGTTCAGGAGCAAGTGAATTACTACTTATGCCTCCTTATCAACCAATGGAATATCTTGATGTATCTAATAACTCCTTAGAAGGTGTCTTGCCTTCTGAAATAGGTAGGATGGGTGGGCTCAAACTGCTGAATCTGGCAAGGAATGGCTTTTCTGGACAGCTGCCAAATGAATTGAACAAACTTTTTTATTTGGAGTACCTTGATTTGTCTAACAACAAATTTACTGGGAATATTCCTGATAAGCTTCCATCCAGCTTAACTGCATTTAATGTGTCAAATAATGATCTATCTGGTCGTGTTCCTGAAAACTTGCGGCATTTCTCTCCTTCATCCTTTCACCCTGGAAATGCAAAACTAATGTTACCAAATGATTCTCCCGAGACTTCTTCGGTGCCTGATAACATTCCAGATAAGGGTAGACATCATAGTTCAAAGGGTAATATCAGGATAGCAATTATTCTTGCCTCAGTGGGTGCTGCAATTATGATTGCTTTTGTTTTATTGGTTTATCATCGAACACAGTTAAAAGAATTTCATGGAAGAAGTGAGTTCACTGGTCAAAATACTAGAAGAGATGTCAAGTTAGGAGGACTTTCGAGGTCTTCTCTCTTCAAGTTCAATACAAACGTTCAACCCCCAACATCTTCATTGAGCTTTTCAAATGATCACCTTTTGACTTCCAATTCAAGGTCACTCTCTGGTGGACAGTCAGAGTTTATAACTGAAATTTCTGAGCATGGTTTAACTCAGGGAATGGTGGCTACTAGTTCAGTATCTGTAAATCCTAATTTGATGGATAACCCTCCCACTTCATCTGGAAGGAAGTCTTCTCCTGGTTCCCCACTGTCGTCCTCACCCCGTTTTATAGAGGCTTGTGAAAAGCCAGTGATGTTGGATGTTTACTCACCAGATCGGTTGGCTGGGGAACTGTTTTTCCTGGATTCTTCCCTAGCATTCACTGCAGAGGAATTATCTCGAGCTCCAGCTGAAGTTCTTGGCAGAAGTAGCCATGGCACTTTATACAAAGCAACTCTGGACAGTGGTCATATGTTGACTGTAAAATGGTTACGGGTGGGATTGGTCAAACATAAAAAGGAATTTGCTAGAGAAGTTAAAAGGATTGGTTCTATGAGGCATCCAAACATTGTCCCATTACTAGCATACTATTGGGGGCCTAGGGAACAAGAGAGGCTTCTTTTAGCTGACTATATACATGGGGACAACTTGGCTCTTCATCTCTATGAGAGCACACCCAGGAGGTACTCCCCATTATCATTCAGCCAGAGAATAAGAGTTGCTGTTGATGTTGCTCGATGTCTTCTATACCTTCATGATCGAGGACTTCCCCATGGAAATCTAAAGCCAACAAATATAGTGTTAGCAGGCCCTGATTTCAATGCTCGTCTTACTGACTACGGTCTGCACCGGCTGATGACGCCGGCTGGAATTGCAGAGCAGATACTAAATCTCGGAGCCCTTGGATACCGTGCTCCAGAACTTGCTACTGCATCCAAACCAGTTCCATCCTTTAAGGCTGATGTCTATGCACTTGGTGTGATCCTAATGGAATTGTTAACAAGAAAAAGTGCAGGTGATATCATTTCAGGGCAATCAGGTGCTGTTGATCTTACAGATTGGGTTAGGCTGTGCGAGCGAGAAGGAAGGGTAATGGACTGTATTGACAGAGACATTGCAGGTGGGGAAGAATCCTCCAAAGAGATGGATGAATTGCTTGCAATATCTCTCAGGTGTATTCTCCCTGTAAATGAGAGGCCTAACATCAGACAAGTTTTTGACGATCTGTGTTCAATATCGGTTTGA 3120 0.4593 MNSPPKLLLLSLLFLTLFTLSSSSSLPELRSLLEFKKGITRDPEKLLDSWAPTTVAESTATCPSSWQGVVCDEESGNVTGIVLDRLNLGGELKFHTLLNLKMLRNLSLSGNDFTGRLPPSLGSLSSLQHLDLSQNKFYGPIPARINDLWGLNYLNLSNNNFKGGFPSGLSNLQQLRVLDLHANHLWAEIGDVLSTLRNVERVDLSLNRFFGGLSLAVENVSSLANTVHFLNLSCNNLNGRFFTNSTIGLFRNLQVLDLSDNSITGQLPSFGSLPALRLLRLPRNQLFGSVPEELLQTSVPLEELDLSFNGFTGSIGVINSTTLNFLNLSSNSLSGSLPTSLRRCTVIDLSRNMLSGDISVIQNWEAPLEVIDLSSNKLSGSLPSILGTYSKLSTIDLSLNELKGSIPRGLVTSSSVTRLNLSGNQFTGPLLLQGSGASELLLMPPYQPMEYLDVSNNSLEGVLPSEIGRMGGLKLLNLARNGFSGQLPNELNKLFYLEYLDLSNNKFTGNIPDKLPSSLTAFNVSNNDLSGRVPENLRHFSPSSFHPGNAKLMLPNDSPETSSVPDNIPDKGRHHSSKGNIRIAIILASVGAAIMIAFVLLVYHRTQLKEFHGRSEFTGQNTRRDVKLGGLSRSSLFKFNTNVQPPTSSLSFSNDHLLTSNSRSLSGGQSEFITEISEHGLTQGMVATSSVSVNPNLMDNPPTSSGRKSSPGSPLSSSPRFIEACEKPVMLDVYSPDRLAGELFFLDSSLAFTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHPNIVPLLAYYWGPREQERLLLADYIHGDNLALHLYESTPRRYSPLSFSQRIRVAVDVARCLLYLHDRGLPHGNLKPTNIVLAGPDFNARLTDYGLHRLMTPAGIAEQILNLGALGYRAPELATASKPVPSFKADVYALGVILMELLTRKSAGDIISGQSGAVDLTDWVRLCEREGRVMDCIDRDIAGGEESSKEMDELLAISLRCILPVNERPNIRQVFDDLCSISV* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1843 1039 PANTHER OS07G0626500 PROTEIN 8 1036 - -
Gso4g1843 1039 SMART LRR_typ_2 172 196 IPR003591 -
Gso4g1843 1039 SMART LRR_typ_2 250 272 IPR003591 -
Gso4g1843 1039 SMART LRR_typ_2 273 297 IPR003591 -
Gso4g1843 1039 SMART LRR_typ_2 124 148 IPR003591 -
Gso4g1843 1039 SMART LRR_typ_2 494 518 IPR003591 -
Gso4g1843 1039 Gene3D Transferase(Phosphotransferase) domain 1 838 1039 - -
Gso4g1843 1039 MobiDBLite consensus disorder prediction 554 576 - -
Gso4g1843 1039 SUPERFAMILY Protein kinase-like (PK-like) 762 1034 IPR011009 -
Gso4g1843 1039 SUPERFAMILY RNI-like 83 428 - -
Gso4g1843 1039 SUPERFAMILY L domain-like 448 541 - -
Gso4g1843 1039 MobiDBLite consensus disorder prediction 692 719 - -
Gso4g1843 1039 Gene3D Phosphorylase Kinase; domain 1 740 836 - -
Gso4g1843 1039 Gene3D Ribonuclease Inhibitor 298 562 IPR032675 -
Gso4g1843 1039 PANTHER OS07G0626500 PROTEIN 8 1036 - -
Gso4g1843 1039 Pfam Protein kinase domain 763 1030 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1843 1039 Gene3D Ribonuclease Inhibitor 27 189 IPR032675 -
Gso4g1843 1039 Pfam Leucine rich repeat N-terminal domain 27 72 IPR013210 -
Gso4g1843 1039 ProSiteProfiles Leucine-rich repeat profile. 252 274 IPR001611 GO:0005515
Gso4g1843 1039 MobiDBLite consensus disorder prediction 692 717 - -
Gso4g1843 1039 ProSiteProfiles Protein kinase domain profile. 759 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1843 1039 Pfam Leucine Rich Repeat 252 271 IPR001611 GO:0005515
Gso4g1843 1039 Gene3D Ribonuclease Inhibitor 190 297 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1843 Gso-Chr4 48691462 48697456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1843 19 1037 Receptor kinase-like Gene Family AT5G65700 26.419 3.60e-61 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso4g1843 Pkinase 7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1843 - - gmx:100802768 1937.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1843 4 48691462 48697456 Gso6g1227 6 11948585 11953726 GST