Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1809 ATGGCTGCCATGAACTCTAGCGTATTGGCCTGTAGCTATGCCATATCAGGTGCAGCGTGTTCGGAGCTCAATGGGAAGGTCACTTCCGTGGCCTATGTTGCATCCTCTGGCTACAAGTTGCCATTGATCAAAGCTGAGGCCAGAGTTCCTAAAGCCAAAGAATCTGAAGGAGGAAGGAGAGGTGCCCTTGTTCTCTTGGCAGCTACCCTTTTCACCTCTGCAGCTTCCAATTCTTCTGCCAATGCTGGGATCATTGAAGATTACCTTGAGAGGAGCAAGGCCAACAAGGAATTGAATGACAAGAAGAGGTTAGCTACTACTGGAGCAAACTTTGCAAGAGCATACACCGTGGAATTCGGTAGTTGCAAGTTCCCTGAGAACTTCACTGGTTGCCAAGATCTTGCCAAACAAAAGAAAGTGCCATTCCTTAGTGACGACTTGGAGCTTGAATGTGAAGGAAAGGACAAATACAAGTGCGGTTCTAATGTTTTCTGGAAATGGTGA 504 0.4702 MAAMNSSVLACSYAISGAACSELNGKVTSVAYVASSGYKLPLIKAEARVPKAKESEGGRRGALVLLAATLFTSAASNSSANAGIIEDYLERSKANKELNDKKRLATTGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFLSDDLELECEGKDKYKCGSNVFWKW* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1809 167 Gene3D - 83 167 IPR044907 -
Gso4g1809 167 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 167 IPR008796 GO:0009522|GO:0015979
Gso4g1809 167 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 44 167 IPR008796 GO:0009522|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1809 Gso-Chr4 48316803 48318335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1809 1 138 Calmodulin-binding Proteins AT5G64040 65.493 3.57e-61 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1809 K02701 - gmx:100499729 306.99