Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1769 ATGTCTGGAAAGGCGAAGAGGAGAGACGACGACGATGCTTCCGACGCCGACTCCGAAGGCCACGCGCCGCCCATGAAGTCCCTCAAGAAGGATTCCGACGACGATCCCGACTCTGTTACCATTTGCGAAATTTCGAAGAACAGGAGGGTTGCCGTGAGGAACTGGAAAGGCAGCATTATGGTTGACATTCGCGAGTTTTACGTCAAAGATGGCAAGCAATTGCCTGGCAGGAAAGGTATCTCGTTGACCATGGATCAGTGGAATGTGCTTCGTAATCATGTCGAAGAAATTGACAAGGCAGTTAATGAGAATTCTTAG 318 0.5 MSGKAKRRDDDDASDADSEGHAPPMKSLKKDSDDDPDSVTICEISKNRRVAVRNWKGSIMVDIREFYVKDGKQLPGRKGISLTMDQWNVLRNHVEEIDKAVNENS* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1769 105 MobiDBLite consensus disorder prediction 1 40 - -
Gso4g1769 105 Gene3D Transcriptional Coactivator Pc4; Chain A 29 105 IPR009044 GO:0003677|GO:0006355
Gso4g1769 105 PANTHER BNAC09G47220D PROTEIN 1 103 - -
Gso4g1769 105 Pfam Transcriptional Coactivator p15 (PC4) 42 93 IPR003173 GO:0003677|GO:0006355
Gso4g1769 105 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 1 103 IPR045125 GO:0003713|GO:0060261
Gso4g1769 105 SUPERFAMILY ssDNA-binding transcriptional regulator domain 41 102 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1769 Gso-Chr4 47806620 47808629 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Gso4g1769 PC4 4.3e-25 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1769 K25815 - gmx:100820368 193.741