Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1755 ATGAAGGGAGAATTAGAGTTGCCACCTGGGTTCAGATTTCACCCCACTGATGAAGAATTGGTGAATCACTACTTGTGTAGGAAGTGCGCTGGTCAACCAATCGCGGTTCCCGTCATCAAAGAGGTCGATTTGTACAAGTTTGATCCATGGCAGCTTCCAGAAATTGGTTTTTACGGCGAGAAAGAATGGTACTTCTTTTCTCCTCGGGACCGGAAATACCCGAACGGTTCACGGCCGAACCGCGCCGCCGGAAGCGGCTATTGGAAAGCCACCGGCGCTGATAAACCGATCGGAAAACCGAAAGCGCTTGGGATCAAGAAAGCTCTGGTTTTTTACGCCGGAAAAGCCCCCAAAGGTGTGAAAACCAATTGGATCATGCACGAATATCGCCTCGCCAATGTTGACCGATCTGCCTCCAAGAAAAAAAACAACAACTTGAGGCTTGATGATTGGGTGTTGTGTCGAATCTACAACAAGAAAGGGAAGATTGAGAAATACAACACAGGCGCAGCGAAGATGAATGTTGAGATGGTTCATAGTTTTGAGCACGAGAACGAGACGAAGCCAGAGATTCATAAGCTAGGAAATGAGCAATTGTACATGGAGACTTCGGATTCGGTGCCAAGGTTGAACACGGACTCGAGCAGTTCGGAGCACGTGGTTTCGCCCGATGTCACGTGCGAGAGGGAGGTGCAGAGCGACCCCAAGTGGAACGATGATCTGGACCTAAAGCTAGAAAACGCGTTTGATTTTCAGTTTAATTACTTGGACGATAATAACCTTTCCGTGGATGATTACCTTTTTGGCACTGTTCAGTATCAAATGGGCCAGCTCTCGCCCTTGCAGGACATGTTCATGTACCTACAGAAGATGTGA 876 0.4806 MKGELELPPGFRFHPTDEELVNHYLCRKCAGQPIAVPVIKEVDLYKFDPWQLPEIGFYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSASKKKNNNLRLDDWVLCRIYNKKGKIEKYNTGAAKMNVEMVHSFEHENETKPEIHKLGNEQLYMETSDSVPRLNTDSSSSEHVVSPDVTCEREVQSDPKWNDDLDLKLENAFDFQFNYLDDNNLSVDDYLFGTVQYQMGQLSPLQDMFMYLQKM* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1755 291 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 5 268 - -
Gso4g1755 291 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Gso4g1755 291 SUPERFAMILY NAC domain 3 159 IPR036093 GO:0003677|GO:0006355
Gso4g1755 291 Gene3D NAC domain 16 165 IPR036093 GO:0003677|GO:0006355
Gso4g1755 291 PANTHER NAC TRANSCRIPTION FACTOR 56 5 268 - -
Gso4g1755 291 ProSiteProfiles NAC domain profile. 7 159 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1755 Gso-Chr4 47662104 47663938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1755 1 290 NAC Transcription Factor Family AT1G01720 62.458 5.05e-124 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso4g1755 NAM 1.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1755 - - gmx:100814504 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1755 4 47662104 47663938 Gso4g1755 4 47662104 47663938 ECH