Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1735 ATGAGGGCCCTTCTCAGGAATCACCTCTTGCGTTTGTCATGTTCTCCAGCTCGCACGCTTCTGGTTCGGCTTCAAGCGTGCGAGCTGTCATCGTCATCTTCTTCTCCTCCTCGTGACTCCCGATACGTTAGGGTTTCGGTGTGGTGGGATTTGAGGAGCTGCCCGGTGCCTGATGACGTGGACCCTTTGAAGGTTGCGCCGGCAATCAGGCAGGCCGTGAGGGCCAACGGGATCAAAGGTCCAATTGCCATCAACGCTTTCGGGAATCTTAGCTCCCTCCCCGAGCACCACCTGGACACACTGGCTTCAAGCGGCATTCAAATCACCCACTTTCCTCAAGGTTGA 345 0.5623 MRALLRNHLLRLSCSPARTLLVRLQACELSSSSSSPPRDSRYVRVSVWWDLRSCPVPDDVDPLKVAPAIRQAVRANGIKGPIAINAFGNLSSLPEHHLDTLASSGIQITHFPQG* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1735 114 PANTHER EMB|CAB71880.1 8 113 - -
Gso4g1735 114 PANTHER LIMKAIN B LKAP 8 113 IPR024768 GO:0005777|GO:0010468|GO:1903231
Gso4g1735 114 CDD PIN_limkain_b1_N_like 44 114 - -
Gso4g1735 114 Pfam NYN domain 44 113 IPR021139 GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1735 Gso-Chr4 47428631 47430172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1735 45 110 C2H2 Transcription Factor Family AT3G62850 34.848 1.82e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1735 - - gsj:114410030 223.016