Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso4g1729 | ATGTCGAGTTTCCACGTCGGCGGCAAGGTCGTGGACCAAGTCGATTTGCTGAGGAAGAAGCGATGGCCCTGGCGCCTTGACGTTTGGCCCTTCGCTATTCTCTACGGCGCGTGGCTTTCCACGATTCTTCCCAGCCTCGACTTCGTCGACGCCGCCATTGTCTTCGGCGCCCTCGTCTCGCTTCACATCCTGGTTTTTCTCTTCACCGGTTGGTCCGTTGATTTCAAATGCTTCGCCCATTATAGCAAGGTTAAGAATATTGATCAGGCAGATTCGTGCAAGATTACTCCGGCGAAGTTCTCGGGTTCGAAAGAAGTTGTGCCGCTTCATTCACGGAAAAGTTCTGCAGCTTCTTCATCAGCGGTGGATTTGGAAGAGAACTACTTCGATTTTAGAAAGCAATGTTTTGTGCATTCAAAGGAGAAGGGGACCTTTTGCAAGCTTTCCTACCCTACTAAAGAAACATTTGGATATTATCTCAAGTGTAGTGGCCATGGCTCTGAAGCTAAAGTTCTTGCTGCTACTGAGAAATGGGGGCGGAATGTATTTGATTATCCTCAGCCAACATTTCAGAAATTGATGAAAGAGCACTGCATGGAACCTTTTTTCGTATTTCAGGTTTTCTGTGTGGGTCTCTGGTGTTTAGATGAATATTGGTATTACAGTTTGTTCACTCTATTTATGCTGTTTATGTTTGAGTCAACCATGGCAAAAAGTCGGTTGAAAACTCTTACCGAGTTAAGACGTGTTAGAGTGGATAGTCAGATCCTAATGGTTCATCGCTGTGGCAAGTGGGTAAAACTCTCTGGTACAGATCTTTTGCCTGGTGATGTTGTCTCCATAGGTCGCTCTTCTGGTCAGAATGGGGAGGAGAAGTCTGTACCAGCAGACATGCTTCTATTGGCTGGAAGTGTGATTGTGAATGAAGCTATTCTGACAGGCGAGTCTACTCCTCAATGGAAGATTTCAATCGCGGGTAGGGCGATGGAGGAGACATTGTCTGCAAAGCGAGATAAAAACCATGTGTTATTTGGTGGAACTAAAATATTGCAGCACACTCCAGATAAGAGTTTTCCTCTAAAAACACCTGATGGTGGCTGCTTGGCTGTTATCTTGAGAACGGGGTTTGAAACAAGTCAAGGAAAGTTGATGCGAACAATCTTATTCTCTACAGAAAGGGTGACTGCTAATAGCTGGGAAAGTGGATTCTTCATTTTATTCCTGGTTGTATTTGCCCTTATTGCTGCTGGCTATGTGCTTGTTAAGGGGTTAGAAGATCCCACAAGGAGCAAGTATAAACTTATACTAAGTTGTTCACTTATTGTTACTTCTGTGATACCTCCTGAGTTACCAATGGAATTATCAATAGCTGTTAATACTTCTCTGATTGCACTGGCACGGCGTGGGATTTTTTGCACAGAGCCTTTTCGAATACCATTTGCTGGAAAGGTTGATATATGCTGTTTTGACAAGACAGGGACACTTACATCTGATGACATGGAATTTTCTGGAGTTGTTGGGTTGAATGGAACTACAGATTTGGAATCTGATACGAGTAAAGTGCCTGTGCGAACAGTGGAAATCCTGGCTTCTTGCCATGCATTGGTATTTGTTGAAAATAAGCTGGTTGGTGATCCTCTTGAGAAGGCTGCACTTAGGGGAATTGACTGGAGTTATAAATCTGATGACAAGGCTGTTCCAAAAAAGGGAACTGGCCAACCTGTCCAAATTGTACATCGGTACCATTTTGCATCTCACTTAAAACGAATGGCAGTTGTTGTTCGCATTCAGGAGGAATTTTTTGCCTTTGTGAAGGGTGCCCCTGAAGTTATACAAGATAGGCTCATTGATATACCACCATCATATGTTGAGACCTACAAAAAATACACACGTCAAGGGTCTCGTGTTCTTGCTCTGGCTTACAAGTCTCTTGATGACATGACAGTCAGTGAAGCTAGAAGCTTGGATAGGGATATAGTGGAGAGTAGACTTACTTTTGCAGGTTTTGTGGTATTTAATTGTCCCATAAGATCAGATTCAGCCACTGTTTTATCTGAATTGAAAGAATCCTCACATGACTTAGTGATGATTACCGGTGACCAAGCTTTGACAGCTTGCCATGTTGCTAGCCAAGTTCATATTATATCAAAACCAACATTAATCCTTGGCCCGACACGAAATGGTGAGGGATATAATTGGGTGTCCCCTGATGAGACTGAAAACATTCACTACAGTGAGAAAGAGGTCGAGTCTTTATCAGAAACTCATGATCTCTGTATTGGGGGTGATTGCATTGAGATGTTGCAACAGACATCAGCTCATCTTCGGGTCATTCCTTATGTTAAGGTTTTTGCTAGAGTTGCTCCTGAGCAAAAAGAACTTATCATGACCACTTTCAAAACGGTGGGACGGTTAACTTTGATGTGTGGGGATGGAACCAATGATGTTGGAGCTTTGAAACAGGCCCATGTAGGAATTGCTCTTCTGAATGCATTGCCTCCAACTCAAAGTGGAAACTCCTCTTCAGATTCATCTAAGGAAGAAGGTTCAAAATCTGGCAAGCAAAAGAAATCTAAGCCTGCTAGTGAAGGCACTTCAAAAGCCAAAGTTGCTTCAAAATCAGATTCCACTAGTCACTCATCTGGTAACCGTCATCAGGCAGCTGTTGAGATGCAACGGCAGAAGCTTAAAAAGATGATGGACGAGCTTAATGAGGAGGGAGATGGTCGTGCACCCATTGTCAAGCTTGGGGATGCCTCAATGGCATCTCCATTCACTGCTAAGCATGCATCTGTTGCTCCCACCACTGATATAATTCGTCAAGGTAGGAGTACCCTAGTGACAACCCTCCAGATGTTTAAAATTCTGGGTCTCAATTGTCTTGCTACTGCATATGTGTTGAGTGTTATGTATCTAGATGGTGTCAAGCTAGGTGACATACAAGCCACAATAAGTGGTGTCTTCACTGCTGCATTTTTCCTCTTTATCTCACATGCACGCCCTCTTCCCACTCTTTCTGCTGAACGTCCTCACCCCAACATCTTCTGTGCTTATGTTTTCCTTTCCCTCCTGGGACAATTTTCTATTCACCTGCTTTTCCTGATCTCGTCTGTGAAAGAAGCTGAAAAACACATGCCAGATGAATGCATTGAGCCTGATGCAGATTTTCATCCCAACCTGGTGAATACTGTTTCCTATATGGTGAGCATGATGCTTCAGGTGGCCACATTTGCTGTGAACTATATGGGCCATCCCTTCAACCAGAGTATTTCGGAAAACAGGCCGTTCCGGTATGCACTTGTTGCTGCTGTTGTTTTCTTTACTGTGATCACATCAGATCTCTTCAGGGACTTGAATGACTGGTTGAAGTTAGTGCCATTGCCAGCGGGATTAAGGGATAAACTATTGCTTTGGGCGTTTCTAATGTTTTTGGTTTGCTATTCGTGGGAGAGACTGTTGAGGTGGGCCTTCCCTGGCAAGATCCCAGCTTGGAAGAAGCGACAACGGCTTGCTGTATCTAATTTAGAAAAGAAACAGGTCTAA | 3543 | 0.4383 | MSSFHVGGKVVDQVDLLRKKRWPWRLDVWPFAILYGAWLSTILPSLDFVDAAIVFGALVSLHILVFLFTGWSVDFKCFAHYSKVKNIDQADSCKITPAKFSGSKEVVPLHSRKSSAASSSAVDLEENYFDFRKQCFVHSKEKGTFCKLSYPTKETFGYYLKCSGHGSEAKVLAATEKWGRNVFDYPQPTFQKLMKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTELRRVRVDSQILMVHRCGKWVKLSGTDLLPGDVVSIGRSSGQNGEEKSVPADMLLLAGSVIVNEAILTGESTPQWKISIAGRAMEETLSAKRDKNHVLFGGTKILQHTPDKSFPLKTPDGGCLAVILRTGFETSQGKLMRTILFSTERVTANSWESGFFILFLVVFALIAAGYVLVKGLEDPTRSKYKLILSCSLIVTSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFSGVVGLNGTTDLESDTSKVPVRTVEILASCHALVFVENKLVGDPLEKAALRGIDWSYKSDDKAVPKKGTGQPVQIVHRYHFASHLKRMAVVVRIQEEFFAFVKGAPEVIQDRLIDIPPSYVETYKKYTRQGSRVLALAYKSLDDMTVSEARSLDRDIVESRLTFAGFVVFNCPIRSDSATVLSELKESSHDLVMITGDQALTACHVASQVHIISKPTLILGPTRNGEGYNWVSPDETENIHYSEKEVESLSETHDLCIGGDCIEMLQQTSAHLRVIPYVKVFARVAPEQKELIMTTFKTVGRLTLMCGDGTNDVGALKQAHVGIALLNALPPTQSGNSSSDSSKEEGSKSGKQKKSKPASEGTSKAKVASKSDSTSHSSGNRHQAAVEMQRQKLKKMMDELNEEGDGRAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDIQATISGVFTAAFFLFISHARPLPTLSAERPHPNIFCAYVFLSLLGQFSIHLLFLISSVKEAEKHMPDECIEPDADFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSISENRPFRYALVAAVVFFTVITSDLFRDLNDWLKLVPLPAGLRDKLLLWAFLMFLVCYSWERLLRWAFPGKIPAWKKRQRLAVSNLEKKQV* | 1181 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso4g1729 | 1180 | Coils | Coil | 886 | 906 | - | - | |
Gso4g1729 | 1180 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 167 | 1158 | IPR023298 | - | |
Gso4g1729 | 1180 | ProSitePatterns | Hypothetical cof family signature 2. | 809 | 831 | - | - | |
Gso4g1729 | 1180 | Gene3D | - | 669 | 844 | IPR023214 | - | |
Gso4g1729 | 1180 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 494 | 678 | IPR023299 | GO:0000166 | |
Gso4g1729 | 1180 | MobiDBLite | consensus disorder prediction | 832 | 846 | - | - | |
Gso4g1729 | 1180 | Pfam | haloacid dehalogenase-like hydrolase | 485 | 713 | - | - | |
Gso4g1729 | 1180 | PANTHER | CATION-TRANSPORTING ATPASE-RELATED | 1 | 1172 | - | - | |
Gso4g1729 | 1180 | Pfam | E1-E2 ATPase | 258 | 468 | - | - | |
Gso4g1729 | 1180 | SUPERFAMILY | HAD-like | 483 | 835 | IPR036412 | - | |
Gso4g1729 | 1180 | SUPERFAMILY | Calcium ATPase, transduction domain A | 255 | 387 | IPR008250 | - | |
Gso4g1729 | 1180 | MobiDBLite | consensus disorder prediction | 847 | 863 | - | - | |
Gso4g1729 | 1180 | CDD | P-type_ATPase_cation | 170 | 1096 | - | - | |
Gso4g1729 | 1180 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 490 | 496 | IPR018303 | - | |
Gso4g1729 | 1180 | MobiDBLite | consensus disorder prediction | 832 | 891 | - | - | |
Gso4g1729 | 1180 | Gene3D | - | 483 | 668 | IPR023299 | GO:0000166 | |
Gso4g1729 | 1180 | SFLD | p-type atpase | 469 | 944 | IPR044492 | - | |
Gso4g1729 | 1180 | PANTHER | CATION-TRANSPORTING ATPASE | 1 | 1172 | - | - | |
Gso4g1729 | 1180 | MobiDBLite | consensus disorder prediction | 865 | 888 | - | - | |
Gso4g1729 | 1180 | SFLD | Haloacid Dehalogenase | 469 | 944 | - | - | |
Gso4g1729 | 1180 | PRINTS | P-type cation-transporting ATPase superfamily signature | 308 | 322 | - | - | |
Gso4g1729 | 1180 | PRINTS | P-type cation-transporting ATPase superfamily signature | 488 | 502 | - | - | |
Gso4g1729 | 1180 | PRINTS | P-type cation-transporting ATPase superfamily signature | 690 | 700 | - | - | |
Gso4g1729 | 1180 | PRINTS | P-type cation-transporting ATPase superfamily signature | 809 | 828 | - | - | |
Gso4g1729 | 1180 | Gene3D | - | 226 | 388 | - | - | |
Gso4g1729 | 1180 | TIGRFAM | P-ATPase-V: P-type ATPase of unknown pump specificity (type V) | 43 | 1138 | IPR006544 | GO:0006812|GO:0016021|GO:0019829|GO:0140358 | |
Gso4g1729 | 1180 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 403 | 512 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Gso4g1729 | 1180 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 576 | 715 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso4g1729 | Gso-Chr4 | 47319122 | 47333800 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso4g1729 | 1 | 1179 | Primary Pumps ATPases | AT5G23630 | 77.918 | 0.0 | 1919 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso4g1729 | K14950 | - | gmx:100807022 | 2312.72 |