Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso4g1729 | ATGTCGAGTTTCCACGTCGGCGGCAAGGTCGTGGACCAAGTCGATTTGCTGAGGAAGAAGCGATGGCCCTGGCGCCTTGACGTTTGGCCCTTCGCTATTCTCTACGGCGCGTGGCTTTCCACGATTCTTCCCAGCCTCGACTTCGTCGACGCCGCCATTGTCTTCGGCGCCCTCGTCTCGCTTCACATCCTGGTTTTTCTCTTCACCGGTTGGTCCGTTGATTTCAAATGCTTCGCCCATTATAGCAAGGTTAAGAATATTGATCAGGCAGATTCGTGCAAGATTACTCCGGCGAAGTTCTCGGGTTCGAAAGAAGTTGTGCCGCTTCATTCACGGAAAAGTTCTGCAGCTTCTTCATCAGCGGTGGATTTGGAAGAGAACTACTTCGATTTTAGAAAGCAATGTTTTGTGCATTCAAAGGAGAAGGGGACCTTTTGCAAGCTTTCCTACCCTACTAAAGAAACATTTGGATATTATCTCAAGTGTAGTGGCCATGGCTCTGAAGCTAAAGTTCTTGCTGCTACTGAGAAATGGGGGCGGAATGTATTTGATTATCCTCAGCCAACATTTCAGAAATTGATGAAAGAGCACTGCATGGAACCTTTTTTCGTATTTCAGGTTTTCTGTGTGGGTCTCTGGTGTTTAGATGAATATTGGTATTACAGTTTGTTCACTCTATTTATGCTGTTTATGTTTGAGTCAACCATGGCAAAAAGTCGGTTGAAAACTCTTACCGAGTTAAGACGTGTTAGAGTGGATAGTCAGATCCTAATGGTTCATCGCTGTGGCAAGTGGGTAAAACTCTCTGGTACAGATCTTTTGCCTGGTGATGTTGTCTCCATAGGTCGCTCTTCTGGTCAGAATGGGGAGGAGAAGTCTGTACCAGCAGACATGCTTCTATTGGCTGGAAGTGTGATTGTGAATGAAGCTATTCTGACAGGCGAGTCTACTCCTCAATGGAAGATTTCAATCGCGGGTAGGGCGATGGAGGAGACATTGTCTGCAAAGCGAGATAAAAACCATGTGTTATTTGGTGGAACTAAAATATTGCAGCACACTCCAGATAAGAGTTTTCCTCTAAAAACACCTGATGGTGGCTGCTTGGCTGTTATCTTGAGAACGGGGTTTGAAACAAGTCAAGGAAAGTTGATGCGAACAATCTTATTCTCTACAGAAAGGGTGACTGCTAATAGCTGGGAAAGTGGATTCTTCATTTTATTCCTGGTTGTATTTGCCCTTATTGCTGCTGGCTATGTGCTTGTTAAGGGGTTAGAAGATCCCACAAGGAGCAAGTATAAACTTATACTAAGTTGTTCACTTATTGTTACTTCTGTGATACCTCCTGAGTTACCAATGGAATTATCAATAGCTGTTAATACTTCTCTGATTGCACTGGCACGGCGTGGGATTTTTTGCACAGAGCCTTTTCGAATACCATTTGCTGGAAAGGTTGATATATGCTGTTTTGACAAGACAGGGACACTTACATCTGATGACATGGAATTTTCTGGAGTTGTTGGGTTGAATGGAACTACAGATTTGGAATCTGATACGAGTAAAGTGCCTGTGCGAACAGTGGAAATCCTGGCTTCTTGCCATGCATTGGTATTTGTTGAAAATAAGCTGGTTGGTGATCCTCTTGAGAAGGCTGCACTTAGGGGAATTGACTGGAGTTATAAATCTGATGACAAGGCTGTTCCAAAAAAGGGAACTGGCCAACCTGTCCAAATTGTACATCGGTACCATTTTGCATCTCACTTAAAACGAATGGCAGTTGTTGTTCGCATTCAGGAGGAATTTTTTGCCTTTGTGAAGGGTGCCCCTGAAGTTATACAAGATAGGCTCATTGATATACCACCATCATATGTTGAGACCTACAAAAAATACACACGTCAAGGGTCTCGTGTTCTTGCTCTGGCTTACAAGTCTCTTGATGACATGACAGTCAGTGAAGCTAGAAGCTTGGATAGGGATATAGTGGAGAGTAGACTTACTTTTGCAGGTTTTGTGGTATTTAATTGTCCCATAAGATCAGATTCAGCCACTGTTTTATCTGAATTGAAAGAATCCTCACATGACTTAGTGATGATTACCGGTGACCAAGCTTTGACAGCTTGCCATGTTGCTAGCCAAGTTCATATTATATCAAAACCAACATTAATCCTTGGCCCGACACGAAATGGTGAGGGATATAATTGGGTGTCCCCTGATGAGACTGAAAACATTCACTACAGTGAGAAAGAGGTCGAGTCTTTATCAGAAACTCATGATCTCTGTATTGGGGGTGATTGCATTGAGATGTTGCAACAGACATCAGCTCATCTTCGGGTCATTCCTTATGTTAAGGTTTTTGCTAGAGTTGCTCCTGAGCAAAAAGAACTTATCATGACCACTTTCAAAACGGTGGGACGGTTAACTTTGATGTGTGGGGATGGAACCAATGATGTTGGAGCTTTGAAACAGGCCCATGTAGGAATTGCTCTTCTGAATGCATTGCCTCCAACTCAAAGTGGAAACTCCTCTTCAGATTCATCTAAGGAAGAAGGTTCAAAATCTGGCAAGCAAAAGAAATCTAAGCCTGCTAGTGAAGGCACTTCAAAAGCCAAAGTTGCTTCAAAATCAGATTCCACTAGTCACTCATCTGGTAACCGTCATCAGGCAGCTGTTGAGATGCAACGGCAGAAGCTTAAAAAGATGATGGACGAGCTTAATGAGGAGGGAGATGGTCGTGCACCCATTGTCAAGCTTGGGGATGCCTCAATGGCATCTCCATTCACTGCTAAGCATGCATCTGTTGCTCCCACCACTGATATAATTCGTCAAGGTAGGAGTACCCTAGTGACAACCCTCCAGATGTTTAAAATTCTGGGTCTCAATTGTCTTGCTACTGCATATGTGTTGAGTGTTATGTATCTAGATGGTGTCAAGCTAGGTGACATACAAGCCACAATAAGTGGTGTCTTCACTGCTGCATTTTTCCTCTTTATCTCACATGCACGCCCTCTTCCCACTCTTTCTGCTGAACGTCCTCACCCCAACATCTTCTGTGCTTATGTTTTCCTTTCCCTCCTGGGACAATTTTCTATTCACCTGCTTTTCCTGATCTCGTCTGTGAAAGAAGCTGAAAAACACATGCCAGATGAATGCATTGAGCCTGATGCAGATTTTCATCCCAACCTGGTGAATACTGTTTCCTATATGGTGAGCATGATGCTTCAGGTGGCCACATTTGCTGTGAACTATATGGGCCATCCCTTCAACCAGAGTATTTCGGAAAACAGGCCGTTCCGGTATGCACTTGTTGCTGCTGTTGTTTTCTTTACTGTGATCACATCAGATCTCTTCAGGGACTTGAATGACTGGTTGAAGTTAGTGCCATTGCCAGCGGGATTAAGGGATAAACTATTGCTTTGGGCGTTTCTAATGTTTTTGGTTTGCTATTCGTGGGAGAGACTGTTGAGGTGGGCCTTCCCTGGCAAGATCCCAGCTTGGAAGAAGCGACAACGGCTTGCTGTATCTAATTTAGAAAAGAAACAGGTCTAA | 3543 | 0.4383 | MSSFHVGGKVVDQVDLLRKKRWPWRLDVWPFAILYGAWLSTILPSLDFVDAAIVFGALVSLHILVFLFTGWSVDFKCFAHYSKVKNIDQADSCKITPAKFSGSKEVVPLHSRKSSAASSSAVDLEENYFDFRKQCFVHSKEKGTFCKLSYPTKETFGYYLKCSGHGSEAKVLAATEKWGRNVFDYPQPTFQKLMKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTELRRVRVDSQILMVHRCGKWVKLSGTDLLPGDVVSIGRSSGQNGEEKSVPADMLLLAGSVIVNEAILTGESTPQWKISIAGRAMEETLSAKRDKNHVLFGGTKILQHTPDKSFPLKTPDGGCLAVILRTGFETSQGKLMRTILFSTERVTANSWESGFFILFLVVFALIAAGYVLVKGLEDPTRSKYKLILSCSLIVTSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFSGVVGLNGTTDLESDTSKVPVRTVEILASCHALVFVENKLVGDPLEKAALRGIDWSYKSDDKAVPKKGTGQPVQIVHRYHFASHLKRMAVVVRIQEEFFAFVKGAPEVIQDRLIDIPPSYVETYKKYTRQGSRVLALAYKSLDDMTVSEARSLDRDIVESRLTFAGFVVFNCPIRSDSATVLSELKESSHDLVMITGDQALTACHVASQVHIISKPTLILGPTRNGEGYNWVSPDETENIHYSEKEVESLSETHDLCIGGDCIEMLQQTSAHLRVIPYVKVFARVAPEQKELIMTTFKTVGRLTLMCGDGTNDVGALKQAHVGIALLNALPPTQSGNSSSDSSKEEGSKSGKQKKSKPASEGTSKAKVASKSDSTSHSSGNRHQAAVEMQRQKLKKMMDELNEEGDGRAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDIQATISGVFTAAFFLFISHARPLPTLSAERPHPNIFCAYVFLSLLGQFSIHLLFLISSVKEAEKHMPDECIEPDADFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSISENRPFRYALVAAVVFFTVITSDLFRDLNDWLKLVPLPAGLRDKLLLWAFLMFLVCYSWERLLRWAFPGKIPAWKKRQRLAVSNLEKKQV* | 1181 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso4g1729 | 1180 | Coils | Coil | 886 | 906 | - | - | |
| Gso4g1729 | 1180 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 167 | 1158 | IPR023298 | - | |
| Gso4g1729 | 1180 | ProSitePatterns | Hypothetical cof family signature 2. | 809 | 831 | - | - | |
| Gso4g1729 | 1180 | Gene3D | - | 669 | 844 | IPR023214 | - | |
| Gso4g1729 | 1180 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 494 | 678 | IPR023299 | GO:0000166 | |
| Gso4g1729 | 1180 | MobiDBLite | consensus disorder prediction | 832 | 846 | - | - | |
| Gso4g1729 | 1180 | Pfam | haloacid dehalogenase-like hydrolase | 485 | 713 | - | - | |
| Gso4g1729 | 1180 | PANTHER | CATION-TRANSPORTING ATPASE-RELATED | 1 | 1172 | - | - | |
| Gso4g1729 | 1180 | Pfam | E1-E2 ATPase | 258 | 468 | - | - | |
| Gso4g1729 | 1180 | SUPERFAMILY | HAD-like | 483 | 835 | IPR036412 | - |
Showing 1 to 10 of 28 entries
Duplication type information
Functional genes information
Pathway information
Event-related genes