Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1728 ATGGATCTGTGGGGTGCTCATCATCGACTTTTGTTCATTGGTCGGCATGAGGAAGATGGAACTCCTGATACTTCTATGGGAGAGGAATCAAACGATGAAGAAGAAAAAATAATTAAAACTGAACCCGTCTTTGTGCCTGAAATTAAGAAAAGGAAACGCCTTAGCCTTAGTCAGCTTAAAGAGGTGAAAGAGGAGTCACATGGGAAGCAAAGCAGTAGCAAGCCTAAGAGAAAGAAGCATGATAGTAGGGATAGATGGTCAGCTGAGAGGTATCAATTGGCTGAGCAAAACATGTGGGAGGTACTAAAGGCTGAAGGGGCGTCATTTGAAAACCCAATAACCCGACCTGCACTAAGATTGGCTGCCCGCAAACACATTGGAGATACTGGACTTTTAGATCACTTACTGAAGCACATTGATGGTAAAGTGGCACCTGGAGGGACTGAGAGATTCCGAAGATGGTTCAACACCAATGGAATCATGGAGTATTGGTTGGAGAGTGCTGACTTGGACAAGGTGCGCCAGGAGGCAGGGGTGCAGGACCCTTTCTGGATACCGCCATCTGCATATAGGGCAGCCGGTGCCCCTTCCCAAAATATTGATTCTTCTGATGAATTGAAACAGCTTAAAATAGAACTGACACAAATGAAGAAAGATATGCATGAGCTCATTGCCAAGAAGGAAGAGAAAAGTGATATTAACATGATGGAGGAGACACACAAGGAATTTGTGAAGTGGAAATTTATGACTGACCATCGCCTTACTGAAATCATGACTTCTTTGAAGGATGTTCAGGGAAAGTATGGTGAATTGATGATTTGGAAAACTACAGTTGCGCAACAACTTATGGAAATAACTAATAAATTGAATGATCTTCAAGCATCTAGGGAATGCACCACTTATAGTCCTCCTTCAGAAAGGTGGAAAGATTGGATAGAAAGCACCAACCTAGACAATATTCAGGAAGATGCATTTGCTACTTGGATTGGGAATCCAGAGCTACTTAATGTTCCACAAGAGGTTATACTTGAAGATCCCAACACGACCATGCCAACACAGCCACCCAGTGAAGAACTGACTAACAAGAAGAGCGATGTGCTGGAGTTAGTACCTGTAAAACTAGAAGATCAACCAAATGTAACCCCTGATTCTTCTACAACTGTTAATTCGAAGTCAGACCTTGACAACTCATTGATTATGTTTCAGGAGATGTTTATGGATTTATACAAATGGAAAGAGAAAATGGAACAGCAGCTGATGGAGGTATCGAATACTGTATATGGTATGCTTGCAATGAAGTAG 1302 0.4217 MDLWGAHHRLLFIGRHEEDGTPDTSMGEESNDEEEKIIKTEPVFVPEIKKRKRLSLSQLKEVKEESHGKQSSSKPKRKKHDSRDRWSAERYQLAEQNMWEVLKAEGASFENPITRPALRLAARKHIGDTGLLDHLLKHIDGKVAPGGTERFRRWFNTNGIMEYWLESADLDKVRQEAGVQDPFWIPPSAYRAAGAPSQNIDSSDELKQLKIELTQMKKDMHELIAKKEEKSDINMMEETHKEFVKWKFMTDHRLTEIMTSLKDVQGKYGELMIWKTTVAQQLMEITNKLNDLQASRECTTYSPPSERWKDWIESTNLDNIQEDAFATWIGNPELLNVPQEVILEDPNTTMPTQPPSEELTNKKSDVLELVPVKLEDQPNVTPDSSTTVNSKSDLDNSLIMFQEMFMDLYKWKEKMEQQLMEVSNTVYGMLAMK* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1728 433 PANTHER PROTEIN DYAD 4 432 IPR044221 GO:0007131|GO:0051177|GO:0051321
Gso4g1728 433 MobiDBLite consensus disorder prediction 55 87 - -
Gso4g1728 433 MobiDBLite consensus disorder prediction 55 71 - -
Gso4g1728 433 MobiDBLite consensus disorder prediction 15 42 - -
Gso4g1728 433 PANTHER DYAD PROTEIN 4 432 - -
Gso4g1728 433 Coils Coil 199 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1728 Gso-Chr4 47295187 47301265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1728 85 166 PHD Transcription Factor Family AT5G22260 40.964 2.66e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1728 - - gmx:100806484 877.856