Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1689 ATGGCCAAAGAGCAGCAAAAGCAGGATCCCGCGGCAATCACCAACTCCTTCCAAAACCAAAACCAAAACCAAACGCAGGAATTGCAGGGTAAAGGTGAAGTGGAAAAGGAGGAGGAGGCTGAGGCCCCTTTAGCTCTAAGCGTTACATACAAGGTTTTGCACATGTTGGGAGACATCACAGCAGGGCCTGCATCTATGTTCGCGCAATGGCTCCAATTAGTTCGTAAACGCACTTCCAACTGTCGCACTTCTGGCTTCCCTCACCGTTCTTCGAGCATGCCTTCTAGCCCGGGAGAATCTATTGAGGACACGAAGAATGATCAGCAAACAGAGATTAGTTTGTGGGAGAGGCTTGGTAAAGCTGAAATGTTGGACATTGAGTCGAGCTCATTTTCTTGGGACAGACTCTCTTCACTTCACCACACTGAGCACACTAGCAGCAATGAACATTCTGAGGATGAAATGAACCGTGTTCTTGAGGTAACAGTAAATTCTGGAGGGGTAGTCTTCTTTGCCTTTTTCAATGGTCTTGGGAACGACGATGCCTCTTCAAAAGAAGCAGCCGCTGTTATAAAGATATCGTCTTCAAGAATGGCAACACAATCCGAACGTCTTGGTTACGAATTTGCCAAATGGTTGGGAGTCCAAACTCCGCAGGCTAGAGTCATCCACAATACAAGTTTAGAGTGGACCCAGATAAAGGAAGCTACAGAAAAAGCAAGGGATGCTGCAAGTTCTACAACCGATGAAGTTGGTGAAATGACATGCACAGAACTTTTGGAAGCACTTGAACTTAGCCGATGTCTCATGTTTATGAGTTATGTGCACGGTTCACCCTTGCTTGAAAGCTCTAGAGCATTTGAATCACAGGAATTTGCAGAACGAACATCAGCAGCCCTTGGCAGGATAATGTTGCTGGACCTTGTCATCAGAAATGAAGATAGGCTCCCTTGCCGGCAGCTTAGATGGCGTGGGAACTCTGCAAATTTATTATTGGCTGAGAAGATTATCTCAAATACAGATACAGCAGGAGAAACTCCTGATTCTGCAATGAACACATATGGACAGCGAGTGAGTAGGACACCTCAAAAAGAAAAAAGGTCAACTTCAATGGATGGTAGATTGAATTCTCATAATTCTGGACTGGTATCACAATGCTCTGGTCTTTCTGACATGAGTTTTAAAAGTCAAATGTCATTAGAATTAATGCTTACTGACTTTATTGTGGCCATTGATTCTGGTGTTCCTCGTCGACCCCCTGCTGGAAAACGTGCAGATGACCAGGTTAATTATCCTAAGTTGGTCGAGTTACTACTCAATAGCTCAGAGTTTTCCTCTAACCTGTTACATGATATAACCGGAGGGAGACTAGGATTCCCTCATCCAGAAGACACAAATACAATCATTGATGTTCATACTACTGATGTAACATCAGTAGTTCATGCGTTCCGTAGTGGTTTTCGTGCTGCTCTTAGGGATCTGCAGGGATTCCACATATTCCTACTCACACTGCATCAAAAACTTGATAATTTGTTAAGATCATTTATGAATACTATAGGCAAAATATCATCAGGGGAGTCTGAAAAAGAGGATGCAGTGGTTCCTGACTCACCTTCACCCACAGTTGTGGGTAGTTGTCCCTCTCCATCTAGTAAGGAAAGGCTTTCTAATGATGTCCATCAAGATTGTAGTGATTCAGAATCTCAGAGAACCGCTCCAAGGACATCATCGTCTTCAGGCAATAGAGATTGTTGCGACTCTGCTTCTTCCATGTCAAGAGAAGGTTGGCATGGAAAACACTCTAAAGGAAGCGTGGAGTCACATCGTGGTCTCCGCTTGACAACTAAGCTCCGTGACTTACATAAATTTGCCAAGGTTGACTCAGAATCCAATAAAGAATTGGAACAGTGGAATGAAATGCTTAAAAATGATGCTGTCAAGTTATGTTTGGAGCACAATTTTAACACAGGATTTTTCGAGGGTAGTGATAACAACACTGTTGTTGATGCATACGAACTGAAGGTCAGACTTGAGCATATCCTTGAGAGGATTGCCTTGATATCTGAGGCTGCAAATACAGAGAGACCATCTGCGGTTACAAATAGTCTGTTCATTGGTGGAGCACTGGCTGCAAGATCTACATACACACTGCAACGCTTGGGAATCACGCATATTTTATGTTTGTGTACAAATGAAATTGGCCAATCAGATTCTCAATTTCCTGATCTATTCACGTACAAAAATTTCTCTGTATGTGACGATGAAGATTCTAACATCAGCAGCATATTTGAAGAGGCCTGTGATTTTATAGATTATGTTGAACAAGCTGGTCACAGTGTTTTAGTTCATTGCTTCGAGGGGAAAAGCAGAAGTGCTACTTTGGTCCTTGCTTACCTGATGCTTAGAAAGAAATTCACTTTGTTAGAAGCATGGAATGCTCTAAAACGAGTTCATCGCCGATCTCAGCCTAACGATGGTTTTGCAAAGATCTTACTTGATCTGGACCAGAAACTGCACGGGAAGGTTTCAATGGAATGGCAGCAACGGAAACCAATGATGAAAAATTGCCCCATCTGTGGCAAGAATACTGGACTAAGCAGTAGCTCGCTTAAACTACATCTTCAGAAATCACACAAAAAGCTGTCATCAGGGAGCGTAGATAGTGCCATGACAATCGAGATCCAGAAGGCATTAACAACTTTGAAGATTAGCCATGGTGGGAGTGTCAGTCCCAAACCAAGGAAGTCTCATTCAACGATAGAAGCATAG 2769 0.4312 MAKEQQKQDPAAITNSFQNQNQNQTQELQGKGEVEKEEEAEAPLALSVTYKVLHMLGDITAGPASMFAQWLQLVRKRTSNCRTSGFPHRSSSMPSSPGESIEDTKNDQQTEISLWERLGKAEMLDIESSSFSWDRLSSLHHTEHTSSNEHSEDEMNRVLEVTVNSGGVVFFAFFNGLGNDDASSKEAAAVIKISSSRMATQSERLGYEFAKWLGVQTPQARVIHNTSLEWTQIKEATEKARDAASSTTDEVGEMTCTELLEALELSRCLMFMSYVHGSPLLESSRAFESQEFAERTSAALGRIMLLDLVIRNEDRLPCRQLRWRGNSANLLLAEKIISNTDTAGETPDSAMNTYGQRVSRTPQKEKRSTSMDGRLNSHNSGLVSQCSGLSDMSFKSQMSLELMLTDFIVAIDSGVPRRPPAGKRADDQVNYPKLVELLLNSSEFSSNLLHDITGGRLGFPHPEDTNTIIDVHTTDVTSVVHAFRSGFRAALRDLQGFHIFLLTLHQKLDNLLRSFMNTIGKISSGESEKEDAVVPDSPSPTVVGSCPSPSSKERLSNDVHQDCSDSESQRTAPRTSSSSGNRDCCDSASSMSREGWHGKHSKGSVESHRGLRLTTKLRDLHKFAKVDSESNKELEQWNEMLKNDAVKLCLEHNFNTGFFEGSDNNTVVDAYELKVRLEHILERIALISEAANTERPSAVTNSLFIGGALAARSTYTLQRLGITHILCLCTNEIGQSDSQFPDLFTYKNFSVCDDEDSNISSIFEEACDFIDYVEQAGHSVLVHCFEGKSRSATLVLAYLMLRKKFTLLEAWNALKRVHRRSQPNDGFAKILLDLDQKLHGKVSMEWQQRKPMMKNCPICGKNTGLSSSSLKLHLQKSHKKLSSGSVDSAMTIEIQKALTTLKISHGGSVSPKPRKSHSTIEA* 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1689 922 Gene3D Protein tyrosine phosphatase superfamily 678 850 IPR029021 -
Gso4g1689 922 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 764 816 IPR000387 GO:0016311|GO:0016791
Gso4g1689 922 MobiDBLite consensus disorder prediction 341 379 - -
Gso4g1689 922 SMART dsp_5 695 837 IPR020422 GO:0006470|GO:0008138
Gso4g1689 922 MobiDBLite consensus disorder prediction 341 359 - -
Gso4g1689 922 SUPERFAMILY Protein kinase-like (PK-like) 69 428 IPR011009 -
Gso4g1689 922 MobiDBLite consensus disorder prediction 568 588 - -
Gso4g1689 922 MobiDBLite consensus disorder prediction 82 106 - -
Gso4g1689 922 CDD DSP 696 833 - -
Gso4g1689 922 ProSiteProfiles Dual specificity protein phosphatase domain profile. 695 840 IPR020422 GO:0006470|GO:0008138
Gso4g1689 922 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 20 921 IPR035010 GO:0004721|GO:0009737|GO:0043622
Gso4g1689 922 Gene3D - 279 415 IPR036940 GO:0016301
Gso4g1689 922 MobiDBLite consensus disorder prediction 1 40 - -
Gso4g1689 922 MobiDBLite consensus disorder prediction 8 29 - -
Gso4g1689 922 MobiDBLite consensus disorder prediction 524 610 - -
Gso4g1689 922 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 695 840 IPR029021 -
Gso4g1689 922 Pfam Dual specificity phosphatase, catalytic domain 709 835 IPR000340 GO:0008138|GO:0016311
Gso4g1689 922 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 20 921 - -
Gso4g1689 922 MobiDBLite consensus disorder prediction 593 610 - -
Gso4g1689 922 Pfam Actin-fragmin kinase, catalytic 111 389 IPR015275 -
Gso4g1689 922 MobiDBLite consensus disorder prediction 82 103 - -
Gso4g1689 922 ProSitePatterns Tyrosine specific protein phosphatases active site. 782 792 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1689 Gso-Chr4 46874562 46881287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1689 38 906 Protein tyrosine phosphatase (PTP) family AT5G23720 63.647 0.0 1084
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1689 K14165 - gmx:102661225 1714.51