Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1688 ATGAAGTGGCCAACATGGAAGTCCAAGTCCAACACCATGGCAATATCTGTGGTGTTTCTTCACCTGAGTTTCTCCATGGAGGTGTTCTGTCACCCTTCTCATGCAGACACAATTGCTGCGCTTCCTGGCCAACCCCACGTAGGCTTTCAACAGTTCTCAGGATATGTCACAGTTGATGACAAGAAACAAAAGTCTCTCTTTTACTATTTTGCTGAGGCAGAAACTGATCCAGCATCAAAGCCTCTTGTTCTGTGGCTCAATGGAGGACCTGGTTGTTCTTCTCTGGGAGTTGGAGCATTCTCAGAAAATGGACCCTTCAGACCAAATGGAGAATTTCTGATTAAAAATTATTATAGTTGGAATAAAGAGGCAAACATGCTGTATTTGGAGACACCAGTTGGAGTGGGGTTCTCTTATGCTAAAGGTAGCTCCTCCTATATGACTGTGAATGACGAGGCAACAGCCAGGGACAACCTTATATTCCTGCTACGCTGGTTCAACAAGTTCCCTCAATACAGGAGCAGAGACTTGTTTCTAACGGGGGAAAGCTATGCAGGTCATTATGTTCCTCAACTTGCAAAGCTCATAATTGAAATGAACACAAAGAACAAGATATTCAATCTGAAAGGCATTGCCTTGGGTAATCCAGTTCTAGAATATGCCACCGACTTCAATTCAAGGGCTGAGTTCTTCTGGTCTCATGGACTAATATCAGATTCAACCTACAACATGTTCACCACAGTGTGTAACTATTCTAGGTACGTGAGTGAGTACTATAGGGACTCGGTTTCACCTCTTTGTTCAAAGGTAATGGGCCAAGTGAGCAGAGAAACCAGCAAATTTGTGGACAAATATGATGTCACACTTGATGTTTGCATTTCCTCCGTGCTATCACAATCCAAGGTTATTTGTCCTCAATCCCAAGAAGCAAATGAGAGCATAGATGTGTGTGTAGATGACAAGGTTACAAACTACTTAAACCGGAGAGATGTACAAGAGGCACTTCATGCAAAGCTCGTTGGCATTCGCAAGTGGGATGTTTGCAGCAACATACTGGACTATGATATGCTAAACCTGGAAGTGCCTACACTCCCTGTTGTTGGATCACTGATAAAAGCTGGAGTTAAGGTCCTAATTTATAGTGGAGATCAAGATTCTGTAATTCCACTGACTGGAAGCCGTACCTTAGTTCAGAAGTTGGCAAGACAATTAGGACTGAATTCAACAGTCCCTTACAGAGTATGGTTTGAAGGCCAACAGGTTGGTGGGTGGACTCAAGTATATGGCAATATCCTCTCGTTTGCCACTGTTAGAGGTGCCTCCCATGAAGCCCCTTTCTCACAACCTGAAAGATCACTTGTGCTATTCAAGTCATTCTTGGAAGGCAGGCCCTTACCTGACGCTTTCTGA 1410 0.4376 MKWPTWKSKSNTMAISVVFLHLSFSMEVFCHPSHADTIAALPGQPHVGFQQFSGYVTVDDKKQKSLFYYFAEAETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEFLIKNYYSWNKEANMLYLETPVGVGFSYAKGSSSYMTVNDEATARDNLIFLLRWFNKFPQYRSRDLFLTGESYAGHYVPQLAKLIIEMNTKNKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYNMFTTVCNYSRYVSEYYRDSVSPLCSKVMGQVSRETSKFVDKYDVTLDVCISSVLSQSKVICPQSQEANESIDVCVDDKVTNYLNRRDVQEALHAKLVGIRKWDVCSNILDYDMLNLEVPTLPVVGSLIKAGVKVLIYSGDQDSVIPLTGSRTLVQKLARQLGLNSTVPYRVWFEGQQVGGWTQVYGNILSFATVRGASHEAPFSQPERSLVLFKSFLEGRPLPDAF* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1688 469 SUPERFAMILY alpha/beta-Hydrolases 40 466 IPR029058 -
Gso4g1688 469 Gene3D - 317 353 - -
Gso4g1688 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 30 467 IPR001563 GO:0004185|GO:0006508
Gso4g1688 469 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Gso4g1688 469 Gene3D - 363 462 - -
Gso4g1688 469 Gene3D alpha/beta hydrolase 33 294 IPR029058 -
Gso4g1688 469 Pfam Serine carboxypeptidase 43 462 IPR001563 GO:0004185|GO:0006508
Gso4g1688 469 PANTHER CARBOXYPEPTIDASE 30 467 - -
Gso4g1688 469 ProSitePatterns Serine carboxypeptidases, histidine active site. 432 449 IPR033124 GO:0004185
Gso4g1688 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Gso4g1688 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Gso4g1688 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Gso4g1688 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 432 445 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1688 Gso-Chr4 46867036 46870571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1688 325 465 Calmodulin-binding Proteins AT2G22960 29.078 3.04e-16 75.1