Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1683 ATGAAGATCTCCATTCTCTTTATCACAATCTTTTCTTGTGGTTTTCTTGGAAATGTTGTTTCAAATGCTAGTCCTCTTCCATATGAAGCTATTTTTAACTTTGGTGACTCTATAAGTGATACTGGAAATGCTGCTCATAACCACCCACCTATGCCTGGCAATAGTCCTTATGGTTCAACATACTTTAAACATCCTTCTGGACGTATGTCAAATGGACGACTAATCATAGATTTTATAGCCGAGGCATATGGGATGCCAATGTTGCCAGCCTATTTGAATCTCACCAAAGGACAAGACATTAAGAAAGGAGTGAATTTTGCATACGCTGGTTCAACTGCACTTGATAAGGATTTTTTAGTACAAAAAAGAATCAATATAGAGGAAGCTACTTTTTCATTGAGTGTTCAATTTGATTGGTTTAAAGGACTAAAATCCTCCCTTTGTACAAGCAAAGAAGAGTGCGATAATTACTTCAAAAACTCATTGTTTCTAGTAGGAGAGATTGGTGGGAATGACATCAATGCAATCATCCCATATAAAAATATTACAGAACTTCGAGAAATGGTTCCATCAATTGTTGAAACAATTGCCAATACCACCTCTAAATTAATAGAAGAAGGAGCGGTAGAACTAGTGGTACCAGGGAACTTCCCAATTGGGTGTAATTCTGCTGTTTTGGCAATAGTGAATAGCGATAAGAAAGAAGACTATGATCAATTTGGGTGTTTGATAGCTTACAATACTTTCATTGAGTACTACAATGAGCAACTCAAAAAGGCTATAGAGACATTAAGAAAAAATAACGCACATGTTAAGATAACATATTTTGATTACTATGGTGCTACCAAACGTTTATTTCAAGCACCACAACAATATGGCTTTTCTTCCGGTAAGACTGAAACTTTCAGAGCATGTTGTGGAAAGGGTGAACCTTACAATCTCAGTTTTCAAATATTATGTGGTAGTCCTGCTGCAATAGTTTGCTCAGATCCTTCAAAACAAATAAATTGGGATGGGCCTCATTTTACTGAAGCAGCGTATAGGCTAATAGCTAAGGGACTAGTTGAGGGCCCTTTCGCTAATCCATCTCTCAAATCCCCTCCTTTCAAGATAGCTTAG 1119 0.37 MKISILFITIFSCGFLGNVVSNASPLPYEAIFNFGDSISDTGNAAHNHPPMPGNSPYGSTYFKHPSGRMSNGRLIIDFIAEAYGMPMLPAYLNLTKGQDIKKGVNFAYAGSTALDKDFLVQKRINIEEATFSLSVQFDWFKGLKSSLCTSKEECDNYFKNSLFLVGEIGGNDINAIIPYKNITELREMVPSIVETIANTTSKLIEEGAVELVVPGNFPIGCNSAVLAIVNSDKKEDYDQFGCLIAYNTFIEYYNEQLKKAIETLRKNNAHVKITYFDYYGATKRLFQAPQQYGFSSGKTETFRACCGKGEPYNLSFQILCGSPAAIVCSDPSKQINWDGPHFTEAAYRLIAKGLVEGPFANPSLKSPPFKIA* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1683 372 Coils Coil 254 274 - -
Gso4g1683 372 SUPERFAMILY SGNH hydrolase 32 354 - -
Gso4g1683 372 Gene3D SGNH hydrolase 18 357 IPR036514 -
Gso4g1683 372 Pfam GDSL-like Lipase/Acylhydrolase 31 352 IPR001087 GO:0016788
Gso4g1683 372 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 372 - -
Gso4g1683 372 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 2 372 - -
Gso4g1683 372 CDD SGNH_plant_lipase_like 30 358 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1683 Gso-Chr4 46777779 46779601 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1683 5 355 Pollen Coat Proteome AT1G75930 27.147 1.76e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1683 - - gmx:100794616 754.977