Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1671 ATGGGCCTTGTAAAGGGAAAGTGGAAGCAAAACATGATTTCCAAGGCGTGGGAGGGTTGCCGATTAACTTCAAGAAGGCCACACTTGAAACTAAAATCATTGTCGGAGAATGATGATGATCATGAGAAGAAGGGTAGTCAACTAGCCCCTCATGGTTGTTTTTCAGTGCATGTTGGACCAGAGAGACAAAGGTTCGTTGTGAAGACCAAATACGTTAACCACCCACTGTTTCAGATGCTGCTAGAAGAGACAGAACAGGAATATGGGTTCGAGAGTGATGGTCCCATTTGGCTTCCCTGCAACGTCGATTTGTTCTACAAAGTGTTGGCTGAGATGGATGGCGAAGAGAATAATAATAACATCATTATCCACGGTTTTCGAAGAAGCTTTATTACCATGGCTAAGGTTTTTCCTTTTTTGGTTCTTCGCAGCCCTCCACGTCTTCTTAGTCACATGAACAAGGGTCATGGTGCATACAGCGTTATGGATTCGGAATTGCTCAGATAA 507 0.4379 MGLVKGKWKQNMISKAWEGCRLTSRRPHLKLKSLSENDDDHEKKGSQLAPHGCFSVHVGPERQRFVVKTKYVNHPLFQMLLEETEQEYGFESDGPIWLPCNVDLFYKVLAEMDGEENNNNIIIHGFRRSFITMAKVFPFLVLRSPPRLLSHMNKGHGAYSVMDSELLR* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1671 168 PANTHER SMALL AUXIN-UP RNA-RELATED 9 133 - -
Gso4g1671 168 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 9 133 IPR003676 GO:0009733
Gso4g1671 168 Pfam Auxin responsive protein 30 110 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1671 Gso-Chr4 46610388 46611291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1671 3 118 Calmodulin-binding Proteins AT5G20810 36.667 4.25e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1671 K14488 - gmx:100789525 337.421