Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1657 ATGGAATTTAATAAAGATGGTGCCTTAAGGGCTAAAAAACTTGCTGAGAAGATGCTTTTACAGAGGGAATTTGGAGGGGCAAGAATACTCGCAAAGAAGGCTCTAGAATTATATCCCAATCTTGATGGTCTTCCTCAATTTCTAGCAACTATTGAGGTGTATATCTCTTCCGAAGATAGAGTTAATGGAGAACTTGATTGGTACAGGATCCTTGGTGTGCAACCTTTGGCCGATGAAGAAACTATTCGAAGACAATACAGGAAACTGGCTCTTACTCTGCATCCTGATAAAAATAGATCCGTAGGTGCAGATGGGGCATTTAGCCTTATCTCACAGGCTTGGAGTTTATTATCTGATAAAGCCAAGAGAATCACCTATGACCAAAAGTGCAATTTATGGCGTAATGGAAATCCTGGTGGGAAACCTTCTATGCCAGCCAGTCAGAATGGTTCGCATAGTAACATCTTTAATCCTGTGTTGTTGAAACCCACATTTTGGACCTTTTGCAGTTTCTGCAAGACAAATTTTGAGTACCATAATGTTTATGTTAACAGCAATCTTGTCTGTACCTGCTGTCATAAGCCATTTTTGGCTTCCGAGACATTGCCTCCACCTGGATACAGAAATGTTTCATCCACTCAGATGAAGCAACATAACTTCAACTCAATGAGAATGGAAAGAAATTATCATTTTTCAGGAAGGACGCCTATGTCTGCTGTCAATTCATCACTTGGGTCAGGTCCTTTCTCTATGCCTGATGGTATTTCCCGTGTTCCAGCATCAGCTTCTAGTGCTGCAGAAGCTCCTGGTGTTTTTAGGATGTCATCTGAGAATTTGAAGAGAAGGCATGAAGATTCAGCAACTTTCTTGAGGGAGGATGCCCATTTTGGGAATGCTCATGCTGTTGATAGAACTGGTGCTGGTTCAGCTTTTCAGTCCTCTCGTTTTGGTTCAAATTCTATTATGAAAGGAGATAGGCCAAGGAAAAACAGGCCCACTGATGAACATAAAGTTGGTAGTGATAGAAGAGATATGGAAAACAAAACAGCATCTCAAAATGAAGGAATAAACTTGGCAAATGAATTTGGATCAGGAAGGGTTAATGCTGCAGGAAATCACAAACGCACTGGTGTTAGGGACAGATCACAGCATCAAATAAAGAACATATTGGTGGAAAAGGCTCGGAAGGAGATTGTTAAAAAGCTTGATGAATGGAAAGCTTCTTCTGCATCAAATAATTTAGACAAGTCAAAGAATACTGACACAGAAATCAGAGAGAAGGGCAAAGAAAGGGAAGGAAATGTTGTAAAACCTGGTGCACAAGTTGTTGATTCTGAGACCGTCAACAAGAAGTGTTTCTCTGCTGATCTAGAGCCAGAGCTGCCTGGTTCTCTCTCAATGAATGTTCCAGACCCAGATTTCCATGATTTTGATGGAGACCGTACTGAAAATGCTTTTGGTGAGAACCAGGTATGGGCTGCATATGATAATGATGATGGCATGCCGCGTTACTATTGCTTAATCCATGATGTAATCTCAAAGAATCCTTTGAATATGAGGATTAGCTGGTTGAATGCCAAAAGCAATGATGAATTGGCCCCAATAGAGTGGGTCAGTTCTGGCTTTCCCAAGACCAGCGGAGATTTCAGAATAGGAAAGCGTGTATCCTATAGCACTCTTAATTCCTTCTCCCACAGGGTTAAGTGGACAAAAGGTTCAAGAGGGGTTGTCCATATATATCCGAAGAAAGGTGACGTATGGGCTTTGTATCGGAACTGGTCCCTTGACTGGAATAAATTTACTGAAGATGAAATCATACAGAAATATGACATGGTGGAGGTGCTTGAAGACTACTGTGAAGAGAAAGGTGTGAATATTGCCCCACTTGTTAAGGTTTCAGGTTTCAAGACAGTATTCCGCCAGAATGCCGATCTAAGAAAGGTCAAGAATATTTCAAAGGCGGAGATGTTTCGTTTCTCCCACCAGGTACCTTCACACTGGCTTACTGGTGTAGAGGGTCACAATGCTCCGAAAGGTTGCTTGGAGCTTGATCCTGCTGCTACTCCGATGGAACTTCTTCAGGTGTTAGCCGAGGATCTGGAGCAAGTAATTCTAATGACAACTGAAAAATCTGTGGAAGATGAATTGAAGCACAAAGAGAATTCCAGGGAGGAGGGTTTGATCAAGATGTGCCAGACAACTAAGGACGAAGGTTCTGATGAAGGGTTGGGAGAGAAGAAAAGGAAGTCTGAGAGCTGCCTGACAACTAAAAAAGAAGGTTCTGATGAAGGGTTGGGAGAGAAGGAAAGGAAGTCTGAGAGCTGCCTGACAACTAAGGAAGAACGTTCTGATGAAGAATTGGGAGAGAAGGAAAGGAAACCCAAGATCTTGTTTGTATATAAGCGGAGACGTCTAGGGGAAAAGAGAGCCGTGAAGTGTTAA 2442 0.4214 MEFNKDGALRAKKLAEKMLLQREFGGARILAKKALELYPNLDGLPQFLATIEVYISSEDRVNGELDWYRILGVQPLADEETIRRQYRKLALTLHPDKNRSVGADGAFSLISQAWSLLSDKAKRITYDQKCNLWRNGNPGGKPSMPASQNGSHSNIFNPVLLKPTFWTFCSFCKTNFEYHNVYVNSNLVCTCCHKPFLASETLPPPGYRNVSSTQMKQHNFNSMRMERNYHFSGRTPMSAVNSSLGSGPFSMPDGISRVPASASSAAEAPGVFRMSSENLKRRHEDSATFLREDAHFGNAHAVDRTGAGSAFQSSRFGSNSIMKGDRPRKNRPTDEHKVGSDRRDMENKTASQNEGINLANEFGSGRVNAAGNHKRTGVRDRSQHQIKNILVEKARKEIVKKLDEWKASSASNNLDKSKNTDTEIREKGKEREGNVVKPGAQVVDSETVNKKCFSADLEPELPGSLSMNVPDPDFHDFDGDRTENAFGENQVWAAYDNDDGMPRYYCLIHDVISKNPLNMRISWLNAKSNDELAPIEWVSSGFPKTSGDFRIGKRVSYSTLNSFSHRVKWTKGSRGVVHIYPKKGDVWALYRNWSLDWNKFTEDEIIQKYDMVEVLEDYCEEKGVNIAPLVKVSGFKTVFRQNADLRKVKNISKAEMFRFSHQVPSHWLTGVEGHNAPKGCLELDPAATPMELLQVLAEDLEQVILMTTEKSVEDELKHKENSREEGLIKMCQTTKDEGSDEGLGEKKRKSESCLTTKKEGSDEGLGEKERKSESCLTTKEERSDEELGEKERKPKILFVYKRRRLGEKRAVKC* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1657 813 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Gso4g1657 813 PANTHER HEAT SHOCK PROTEIN-LIKE 1 718 - -
Gso4g1657 813 MobiDBLite consensus disorder prediction 305 353 - -
Gso4g1657 813 Pfam Domain of unknown function (DUF3444) 466 671 IPR024593 -
Gso4g1657 813 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Gso4g1657 813 Pfam DnaJ domain 66 127 IPR001623 -
Gso4g1657 813 Gene3D DnaJ domain 64 167 IPR036869 -
Gso4g1657 813 PRINTS DnaJ domain signature 68 86 IPR001623 -
Gso4g1657 813 PRINTS DnaJ domain signature 86 101 IPR001623 -
Gso4g1657 813 PRINTS DnaJ domain signature 102 122 IPR001623 -
Gso4g1657 813 PRINTS DnaJ domain signature 122 141 IPR001623 -
Gso4g1657 813 PANTHER BNAC03G44070D PROTEIN 1 718 - -
Gso4g1657 813 SUPERFAMILY Chaperone J-domain 64 152 IPR036869 -
Gso4g1657 813 MobiDBLite consensus disorder prediction 418 433 - -
Gso4g1657 813 CDD DnaJ 66 119 IPR001623 -
Gso4g1657 813 SMART dnaj_3 65 122 IPR001623 -
Gso4g1657 813 MobiDBLite consensus disorder prediction 322 349 - -
Gso4g1657 813 MobiDBLite consensus disorder prediction 410 433 - -
Gso4g1657 813 MobiDBLite consensus disorder prediction 712 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1657 Gso-Chr4 46411770 46416182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1657 4 204 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.081 6.59e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1657 - - gmx:100788095 1643.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1657 4 46411770 46416182 Gso6g1428 6 14227533 14231882 GST