Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1641 ATGGGGTTTCATGACTTGGTTTTGCTATTCTGTTCAGCTTGGTGTGTGTTTTATGTGGGTAGTTGCAGTGCTCAGTTGCAATCTTCTCAGACCCAAGTGCTTCTCCAGCTGAAAAAGCACTTGGAGTACCCAAAACAGTTGGAAATATGGAGAGATCGTTGGACAGATCTTTGCTCTATTTCTTCTTCTGGGCAAGTGAATGTCACATGCAAGGACAATTTTGTCACTGAGCTCACAATCTTGGGTGATAAACCAACAAAGGGTAGAGATTTTGATGGGTTTGCCAATCCAAATCAAACACTATCAGAGAGCTTCTCCATGGAGTCTTTTGTGGCTACTCTGGCAAGGTTAACCAGCCTTAGAGTCCTTAGTCTTGTCTCTTTGGGCATGTGGGGACCACTCCCTGATAGAATTCACAGACTCTATGCACTTGAACATTTGGACTTGAGTTCCAATTATCTTTATGGATCAATCCCTCCAAAGATTTGCACAATGGTGAACCTTCAAACTCTTAGATTGGGTGATAACTTCTTTAATGGTACCATCTCAAGCTTGTTCAGTTCATCAAACAATCTCACAGTTCTTAGTTTGAAGAGTAACAGGTTGAAGGGTCCATTTCCACTTTCAATCCCTAGTGTCATCACCCTAACTGAAATTGACATGTCATGCAATCAAATATCAGGGAGATTGCAAGATTTAACTGATTTGAGTAGCTTGGAACAACTAGATTTAAGGGAAAACAGGTTAGACTCTAAACTACCTGCAATGCCAAAAGGGTTGATAAGTCTTTTCCTCAGCAGAAACTCTTTCTCAGGTGAAATTCCCGAGCACTATGGTCAACTAGATAGGCTTCAGAAGCTTGATGTTTCCTTCAATTCACTCACAGGCACTGCTCCTGCTGAACTTTTTTCTTTGCCTAACATTAGTTACTTGAATTTGGCATCCAACATGTTGAATGGACCACTCCATAATCACCTAAGATGTAGCAGTCAACTCAGATTTGTTGACATATCATACAATAGATTGGTGGGGGACTTGCCTTCCTCACTCAGCACTAAATCAGAAAATAGAGTTGTTAAGAGTGATGGAAACTGTTTATCTGGGAGTGTGCAGCATCAGCATGCAGTATCCTACTGCACAGAAACTCATGCGAAGAAGAAATCATACAGAGTTGGAATTTTTGTTGGTCTCATTGTGGGAATTCTTGCAATCATTGTGGTTTTGGCTTTGACCATTGTTATAACTTGTAAAAGGTATTTCCCTTGGGGGGTGTCAGAGCAGCACCTATTGCATAAAACAGTTCAAGATAGCAGCTATGCAGCAGGAATCTCCTCTGAGCTTCTCACAAATGCAAGGTATGTTTCTGAAGCCGCAAAGTTAGGCAGAGAGGACCTCCCCACATGTCGGTCATATTCCTTGGAAGAGCTAAAGGAAGCCACAAATAACTTTGACAACTCCACTTTTATGGGTGAGAATATATATGGGAAGCTTTACAGAGGAAAATTGGAGAGTGGAATACAGGTTGTAATAAGGTCCCTGCCTTTGTCAAAAAAGTATTCAATTAGGAATTTCAAACTGAGGTTGGATTTGCTTGCAAAGCTGCGTCACCCTCATTTGGTATCCCTCTTAGGGCACTGCATGGATGGTGCTGTAGGAGAGAATAATGAGGCTAATGTCTTCCTCATTTATGAATACGTGTCAAATGGGACTTTTCAGACTTATCTCTCTGGAGATAGTCCAGGCAAGGTTTTCAATTGGTCAGAGCGATTGTCAGTACTAATTAACATTGCTAAGGCTGTCCACTTCCTACACACTGGCATGATACCTGGTTTCTTCAAAAACCGACTTAAGACCAACAATATCTTGCTGAATGAGAATTGGATGGCAAAGTTGAGTGACTATGGATTGTCCGTTATATCAGAAGAAACTGATGCAAGTGGGGTAAAAGGAGAAAGTCCTGATTCATGGCAAATGAAAATGTTAGAGGATGATGTTTATAGCTTTGGATTCATACTACTCGAGGCACTTGTTGGACCTTCATTATCAGCTAAAAGTGAAGTAAATGTGCTGAATGTAATGGCATCTTTCAATAGTCAAGATGGTTGGAAACAGATTGTGGACCCAGTTGTGCAAGCTACATGCTCTAAAGAGTCTCTATTAGTTGTTATTTCCATAACAAACAAATGTATATCTTCTGAGTCATGGAGCCGACCATCCATTGAGGATGTCCTTTGGAACCTTCAGTATGCATCTCAAATTCAGGCAACACCTGATGGGGATCAGAGAATTTGA 2292 0.4106 MGFHDLVLLFCSAWCVFYVGSCSAQLQSSQTQVLLQLKKHLEYPKQLEIWRDRWTDLCSISSSGQVNVTCKDNFVTELTILGDKPTKGRDFDGFANPNQTLSESFSMESFVATLARLTSLRVLSLVSLGMWGPLPDRIHRLYALEHLDLSSNYLYGSIPPKICTMVNLQTLRLGDNFFNGTISSLFSSSNNLTVLSLKSNRLKGPFPLSIPSVITLTEIDMSCNQISGRLQDLTDLSSLEQLDLRENRLDSKLPAMPKGLISLFLSRNSFSGEIPEHYGQLDRLQKLDVSFNSLTGTAPAELFSLPNISYLNLASNMLNGPLHNHLRCSSQLRFVDISYNRLVGDLPSSLSTKSENRVVKSDGNCLSGSVQHQHAVSYCTETHAKKKSYRVGIFVGLIVGILAIIVVLALTIVITCKRYFPWGVSEQHLLHKTVQDSSYAAGISSELLTNARYVSEAAKLGREDLPTCRSYSLEELKEATNNFDNSTFMGENIYGKLYRGKLESGIQVVIRSLPLSKKYSIRNFKLRLDLLAKLRHPHLVSLLGHCMDGAVGENNEANVFLIYEYVSNGTFQTYLSGDSPGKVFNWSERLSVLINIAKAVHFLHTGMIPGFFKNRLKTNNILLNENWMAKLSDYGLSVISEETDASGVKGESPDSWQMKMLEDDVYSFGFILLEALVGPSLSAKSEVNVLNVMASFNSQDGWKQIVDPVVQATCSKESLLVVISITNKCISSESWSRPSIEDVLWNLQYASQIQATPDGDQRI* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1641 763 Gene3D Phosphorylase Kinase; domain 1 448 565 - -
Gso4g1641 763 PANTHER OS07G0166700 PROTEIN 4 762 IPR045272 GO:0004714|GO:0006468
Gso4g1641 763 ProSiteProfiles Protein kinase domain profile. 483 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1641 763 PANTHER BNAA09G06560D PROTEIN 4 762 - -
Gso4g1641 763 Pfam Protein tyrosine and serine/threonine kinase 489 744 IPR001245 GO:0004672|GO:0006468
Gso4g1641 763 SMART LRR_typ_2 236 263 IPR003591 -
Gso4g1641 763 SMART LRR_typ_2 281 305 IPR003591 -
Gso4g1641 763 SMART LRR_typ_2 141 165 IPR003591 -
Gso4g1641 763 Gene3D Transferase(Phosphotransferase) domain 1 566 760 - -
Gso4g1641 763 Gene3D Ribonuclease Inhibitor 27 259 IPR032675 -
Gso4g1641 763 Gene3D Ribonuclease Inhibitor 260 393 IPR032675 -
Gso4g1641 763 Pfam Leucine rich repeat 283 342 IPR001611 GO:0005515
Gso4g1641 763 SUPERFAMILY L domain-like 30 371 - -
Gso4g1641 763 SUPERFAMILY Protein kinase-like (PK-like) 466 748 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1641 Gso-Chr4 46199081 46204552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1641 6 695 Miscellaneous Gene Families AT5G14210 50.927 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Gso4g1641 PK_Tyr_Ser-Thr 2.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1641 - - gmx:100802978 1346.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1641 4 46199081 46204552 Gso6g1449 6 14431533 14437259 GST