Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1609 ATGGATTCCCCTGCAGTTTCCTCTATCCACTTTCACAACGCCCATGTCTTACCCGAACCAGACCTTTTTATGCACACTCCCGGTGGTAACCGCATTCCAGCGCACGCAACCATTCTGGCTTCGGCATCCCCAGTTTTAGAAAACGTCATTGCGTCCAACCGAGTCGTCAAAATCCACGGCGTTCCCGACGGCGCCGTCACGGCCTTCGTAGCGTTCCTCTACTCCTCCAGGTGCACGGAGGAGGACATGGACAAGTACGGAATCCACCTTCTAGCATTGTCGCACGTGTATTCGGTGCCGCAGCTGAAGCAGAGGTGCATCAAGGGACTGGCCCAGCGCTTGAGCACGGAGAACGTGGTGGACGTGTTGCAACTCTCTCGGCTCTGCGACGCACCGGATCTCTACCTCAAGTGCGTGAAGCTCCTCAGGAACCGTTTCAAAGCCGTGAAGGAAACAGAGGGCTGGAAATTCCTCGAGAGCCACGACCCCTGGCTCGAACTCGACGTTCTCCGCCTCATGGGCGAACTCGAAAAGAGGAAGAGGAGGGTGAGGAAGTGGAGGGAGGAGGAGAGGTTGTACGTGCAGCTGAGCGAGGCGATGGAGTGTTTGGAGCACATATGCACGGAGGGGTGTACGGAGGTGGGGCCATACGAGGTGGAGGTTGGACGACAGAAAACGCCGTGCTCAAAGTTCGCCACGTGTCAGGGTTTGCAGGTGTTGATACGACACTTGGGCACTTGCAACAGGAAGCTCAAAGGAGGGTGTTTGCGGTGTAAGCGTATGTGGCAGCTCTTCAGGCTCCACTCCTCCATTTGCCTATGCCAGAATTCATGCAAGGTTCCTCTTTGCAGGCAAATTCGATTAAAAATGGAGCAAGAGAACATGAAAGATGACGCAAGGTGGAAACTACTGGTGAGGAAGGTGGCCTCGGCCAAAGCCTTGTCTTCCTTGGCACTGCCAAAGAGGAAATTAGATCAGAGCTAG 984 0.5498 MDSPAVSSIHFHNAHVLPEPDLFMHTPGGNRIPAHATILASASPVLENVIASNRVVKIHGVPDGAVTAFVAFLYSSRCTEEDMDKYGIHLLALSHVYSVPQLKQRCIKGLAQRLSTENVVDVLQLSRLCDAPDLYLKCVKLLRNRFKAVKETEGWKFLESHDPWLELDVLRLMGELEKRKRRVRKWREEERLYVQLSEAMECLEHICTEGCTEVGPYEVEVGRQKTPCSKFATCQGLQVLIRHLGTCNRKLKGGCLRCKRMWQLFRLHSSICLCQNSCKVPLCRQIRLKMEQENMKDDARWKLLVRKVASAKALSSLALPKRKLDQS* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1609 327 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 7 326 IPR044513 -
Gso4g1609 327 Gene3D TAZ domain 186 312 IPR035898 -
Gso4g1609 327 PANTHER BTB/POZ AND TAZ DOMAIN PROTEIN 7 326 - -
Gso4g1609 327 SUPERFAMILY POZ domain 28 111 IPR011333 -
Gso4g1609 327 ProSiteProfiles BTB domain profile. 20 82 IPR000210 GO:0005515
Gso4g1609 327 SUPERFAMILY TAZ domain 188 287 IPR035898 -
Gso4g1609 327 Gene3D Potassium Channel Kv1.1; Chain A 19 114 IPR011333 -
Gso4g1609 327 SMART TAZ_2 190 284 IPR000197 -
Gso4g1609 327 Pfam TAZ zinc finger 197 283 IPR000197 -
Gso4g1609 327 CDD BACK 115 162 - -
Gso4g1609 327 Gene3D - 115 185 - -
Gso4g1609 327 Pfam BTB/POZ domain 29 112 IPR000210 GO:0005515
Gso4g1609 327 SMART BTB_4 20 114 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1609 Gso-Chr4 45735707 45738465 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Gso4g1609 zf-TAZ 8.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1609 - - gmx:100813611 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0369 5 3853905 3857413 Gso4g1609 4 45735707 45738465 PCT
Gso17g1066 17 10087665 10090850 Gso4g1609 4 45735707 45738465 PCT
Gso4g1609 4 45735707 45738465 Gso5g0369 5 3853905 3857413 PCT
Gso4g1609 4 45735707 45738465 Gso17g1066 17 10087665 10090850 PCT