Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1605 ATGGCTGAGAAAATGAAAACTCACTACTTTCCTCTCTTTTCATTCTTTTTCTTCTTCTTCTTAATCTCCATCAACGCCAAACTTGATCTCTACCCTTCAGACTACAAGGCACTCCTCACTCTGCAGAAGGACCTCCGAGTCAACGGTCAACTCGCGGCGGCAACTGAGGCGTGCGAAACGGAGGGCGTGCTCTGCGAGCGGAGGCGGCTCTCCGGCAAGGAAACCTACGCGCTCCGAATCACCAGACTCGTCTTCAAATCGAACAACCTAAATGGTGTTTTGTCTCCTTCCATCGGACGCCTCACGGAGCTCAAGGAACTCTCTCTCTCCGACAACCAACTCGTTGACCGAGTCCCTCCCCAAATCGTTGACTGCCGAAAGCTCGAAATCCTCGACCTCGCCAACAACATCTTCTCCGGCGAGGTCCCCTCCGAGCTCTCCTCCCTCACGCGCCTCCGCGTGCTGGACCTCTCCACCAACAGGCTCTCCGGCAACCTTAATTTTCTCAAATACTTTCCCAATTTGGAAACTCTTTCAGTAGCCGACAACCTCTTCACCGGAAGAGTCCCTCCCTCGGTCCGCTCCTTCCGGAACCTACGACACTTTAATTTCTCCGGCAACCGCTTCCTCGACCCCTCTCTACAATCATCCTCACCAGACACAATTCTCTCTAGACGTTTTCTATCTGAAGACGGTGATGGTGATGTTCCTGCACCTGCTCCTGCACCTAATAACTCACAGAAGAAGAAATCCAATGCTTCTACTCATGCTGCTGCTGCTGCACCTGGTCCTGCACCTAACCATACCAATAAGCACAAGCACAGTAAGAGAAAACTCTTGGGGTGGATTCTGGGGTTTGTAGCAGGGGCACTGGGGGGAACCTTATCAGGATTCGTGTTTTCTTTGATGTTCAAGCTCGCTCTCGCGTTGATCAAAGGAAGAGGAAGGAAAGCGGGGCCTGATATCTATAGTCCATTGATCAAGAAAGCAGAAGATTTGGCCTTCTTGGAAAAAGAAGAAGGAATCGCGTCGTTGGAGATCATCGGGCGCGGTGGCTGTGGAGAGGTCTACAAGGCAGAGTTACCGGGAAGCAACGGGAAAATGATCGCTATAAAGAAAATCGTTCAGCCTCCGAAAGACGGTGCTGAGTTAGCAGAAGAGGACAGCAAGGTTCTGAACAAGAAAATGAGGCAAATTCGATCGGAGATCAACACCGTGGGACAAATTAGACACAGAAACCTTCTGCCTCTGCTGGCGCACGTGTCTAGACCGGAATGTCACTACCTTGTGTACGAGTTCATGAAAAATGGAAGCTTGCAAGACACTCTGAGCAAGGTCGAGAGGGGCGAGAGCGAGTTGGATTGGTTGTCAAGGCACAAGATCTCCCTCGGTGTGGCTGCTGGGCTTGAATACCTTCACATGAATCACAACCCACGAATCATTCATAGAGATCTCAAGCCTGCTAATATCCTTCTTGACGATGACATGGAGGCAAGAATTGCTGATTTTGGACTCGCCAAGGCTATGCCCGATTACAAGACTCACATAACAACCTCCAATGTGGCTGGCACTGTGGGCTATATTGCTCCTGAGTATCATCAGATACTCAAGTTCACTGATAAGTGTGATATTTACAGTTATGGAGTGATTCTTGGTGTATTGGTCATTGGTAAGCTTCCTTCTGATGATTTCTTTCAGCACACTGAAGAGATGAGTTTGGTCAAGTGGATGAGGAAGACTTTAAGCTCCGAGAATCCCAAGGAGGCAATTAATTCAAAGCTGCTGGGGAATGGGTATGAGGAGCAGATGCTTCTTGTTTTGAAGATTGCATGCTTTTGCACTATGGATGATCCCAAGGAGAGGCCTAACAGTAAGGATGTTAGGTGCATGCTGTCACAGATCAAACACTGA 1911 0.4919 MAEKMKTHYFPLFSFFFFFFLISINAKLDLYPSDYKALLTLQKDLRVNGQLAAATEACETEGVLCERRRLSGKETYALRITRLVFKSNNLNGVLSPSIGRLTELKELSLSDNQLVDRVPPQIVDCRKLEILDLANNIFSGEVPSELSSLTRLRVLDLSTNRLSGNLNFLKYFPNLETLSVADNLFTGRVPPSVRSFRNLRHFNFSGNRFLDPSLQSSSPDTILSRRFLSEDGDGDVPAPAPAPNNSQKKKSNASTHAAAAAPGPAPNHTNKHKHSKRKLLGWILGFVAGALGGTLSGFVFSLMFKLALALIKGRGRKAGPDIYSPLIKKAEDLAFLEKEEGIASLEIIGRGGCGEVYKAELPGSNGKMIAIKKIVQPPKDGAELAEEDSKVLNKKMRQIRSEINTVGQIRHRNLLPLLAHVSRPECHYLVYEFMKNGSLQDTLSKVERGESELDWLSRHKISLGVAAGLEYLHMNHNPRIIHRDLKPANILLDDDMEARIADFGLAKAMPDYKTHITTSNVAGTVGYIAPEYHQILKFTDKCDIYSYGVILGVLVIGKLPSDDFFQHTEEMSLVKWMRKTLSSENPKEAINSKLLGNGYEEQMLLVLKIACFCTMDDPKERPNSKDVRCMLSQIKH* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1605 636 Pfam Protein kinase domain 345 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1605 636 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE KINASE 9 636 - -
Gso4g1605 636 SUPERFAMILY Protein kinase-like (PK-like) 339 631 IPR011009 -
Gso4g1605 636 Gene3D Ribonuclease Inhibitor 31 232 IPR032675 -
Gso4g1605 636 Gene3D Transferase(Phosphotransferase) domain 1 434 636 - -
Gso4g1605 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Gso4g1605 636 SUPERFAMILY L domain-like 57 215 - -
Gso4g1605 636 MobiDBLite consensus disorder prediction 232 272 - -
Gso4g1605 636 Coils Coil 382 402 - -
Gso4g1605 636 Gene3D Phosphorylase Kinase; domain 1 334 433 - -
Gso4g1605 636 SMART serkin_6 342 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1605 636 Pfam Leucine rich repeat 103 162 IPR001611 GO:0005515
Gso4g1605 636 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 9 636 - -
Gso4g1605 636 ProSiteProfiles Protein kinase domain profile. 342 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1605 Gso-Chr4 45693006 45695244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1605 12 636 Receptor kinase-like Gene Family AT2G31880 63.722 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Gso4g1605 Pkinase 1.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1605 - - gmx:100811980 1211.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1605 4 45693006 45695244 Gso6g1477 6 14886060 14888278 GST