Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1598 ATGAATTTTATTGTTCGGTTCTTCAACAGCCAGTTCTTAGACAAAGTTGAGGAGAAGTTCCCCAAAGATGCTGAATTAATTGTTGCATGCCAGAAGGGACTGAGATCACTTGCTGCTTGTGAACTACTGTATAATGCTGGCTATAGAAATCTGTTTTGGGTTCAAGGAGGATATGAAGCTGCTGAAGGAAAGGATCTCATTGTAGAGGGCCCAGTGCCTCTCAAGTTTTCTGGAATTGGTGGAGTTTCAGAATTCCTTGGTTGGACTGATCAACAAAGAGCAGCTGCAGCCAAGGAAGGTTGGGGATATAGATTAGTGTTTTCTGCACGCCTGATTGGAGTCTTTCTCGTTGCCGATGCCCTATATATTGGTGCTCAGCAAATTGGGCGCTATCTTCAGGATATCTGGACCCATTGA 417 0.4412 MNFIVRFFNSQFLDKVEEKFPKDAELIVACQKGLRSLAACELLYNAGYRNLFWVQGGYEAAEGKDLIVEGPVPLKFSGIGGVSEFLGWTDQQRAAAAKEGWGYRLVFSARLIGVFLVADALYIGAQQIGRYLQDIWTH* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1598 138 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 11, CHLOROPLASTIC 8 136 IPR044664 -
Gso4g1598 138 CDD RHOD 16 60 - -
Gso4g1598 138 Gene3D - 3 104 IPR036873 -
Gso4g1598 138 ProSiteProfiles Rhodanese domain profile. 10 70 IPR001763 -
Gso4g1598 138 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 7 60 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1598 Gso-Chr4 45637319 45640305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1598 8 138 Sulfurtransferasese or Rhodanese AT4G24750 75.573 3.25e-70 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1598 - - gsj:114409887 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1598 4 45637319 45640305 Gso6g1484 6 14939704 14943697 GST