Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1597 ATGAAGTTGAGACTCCAAGACACTTCTCGGAGATTTGATCAACTGTTTGATCAGATACTAAATGAACACATGGGTGCCAATAAAGAAGAGGAGTATAAGGACCTTGTTGATGTTTTACTAGAGGTGCAGAGAAATGGCTCGGATGAGATGCCTCTCACCACTGATAATATCCAGGCAATCATCTTGGACATGTTTGCTGCAGGAACTGATACAACCTTCATAACTCTTGATTGGGCAATGACAGAGCTACTAATGAATCCACAGGCCATGGAAAAAGCACAAAAGGAAGTACGAAGCATCTTGGGAGAAAGACGAGTTGTCGCAGAGAGTGATCTGCATCAATTGGAGTACATGAGAGCTGTTATCAAAGAGATATTTCGGTTGCATCCTCAAGTTCCAGTATTAGTCCCAAGAGAATCCATGGAAGATGTTGTGATAGAGGGGTACAGAATTCCAGCTAAAACAAGATTTTTTGTCAATGCTTGGGCAATAGGTAGGGACCCAGAAAGTTGGGAGGATCCTAATGCATTTAAGCCAGAGAGGTTTTTAGGGAGTGATATTGACTACAGAGGGCAGGATTTTGAGCTAATACCATTTGGAGCAGGTAGAAGAGGTTGTCCAGCTATTACTTTTGCCACTGCAGTTGTTGAGCTTGCTCTAGCTCAGCTCCTCTACATTTTCGTTTGGGAGCTTCCTCCTGGTATTACTGCTAAAGACTTGGACCTCACTGAAGTCTTTGGCATCTCAATGCACAGGAGAGAACATCTTCATGTGGTTGCTAAGCCATACTTTCCATGA 798 0.4311 MKLRLQDTSRRFDQLFDQILNEHMGANKEEEYKDLVDVLLEVQRNGSDEMPLTTDNIQAIILDMFAAGTDTTFITLDWAMTELLMNPQAMEKAQKEVRSILGERRVVAESDLHQLEYMRAVIKEIFRLHPQVPVLVPRESMEDVVIEGYRIPAKTRFFVNAWAIGRDPESWEDPNAFKPERFLGSDIDYRGQDFELIPFGAGRRGCPAITFATAVVELALAQLLYIFVWELPPGITAKDLDLTEVFGISMHRREHLHVVAKPYFP* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1597 265 Pfam Cytochrome P450 6 253 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1597 265 PRINTS E-class P450 group I signature 56 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1597 265 PRINTS E-class P450 group I signature 76 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1597 265 PRINTS E-class P450 group I signature 119 137 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1597 265 PRINTS E-class P450 group I signature 160 184 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1597 265 PRINTS E-class P450 group I signature 196 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1597 265 PRINTS E-class P450 group I signature 206 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1597 265 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 2 263 - -
Gso4g1597 265 Gene3D Cytochrome P450 1 263 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1597 265 SUPERFAMILY Cytochrome P450 3 262 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1597 265 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 199 208 IPR017972 GO:0005506|GO:0016705
Gso4g1597 265 PRINTS P450 superfamily signature 67 84 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1597 265 PRINTS P450 superfamily signature 120 131 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1597 265 PRINTS P450 superfamily signature 197 206 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g1597 265 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 2 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1597 Gso-Chr4 45634404 45636116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1597 27 259 Cytochrome P450 AT2G45570 51.931 2.65e-85 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1597 - - gmx:100815921 534.258