Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1589 ATGCCGCCGGATTCCTCCGAGCTAGACCTCGACGATCCTGACATCGAGTTTGTTGAGGTTGATCCCACGGGTCGCTATGGTCGGTACAAGGAAGTTTTAGGGAAAGGGGCTTTCAAGAAAGTATATCGAGCGTTTGATGAGTTGGAAGGGATTGAAGTGGCGTGGAATCAGGTTAAGGTGGCGGATCTGTTGCGTAACTCTGAAGATTTGGAGCGACTTTATTCAGAAGTTCATTTGCTCAAGACTTTGAAGCATAAGAATATAATTAAGTTTTACAATTCATGGGTTGACACCAAGAATGAGAACATCAACTTCATTACTGAAATTTTCACCTCTGGAACGTTGCGCCAATACCGGAAGAAACATAAGCACGTTGATTTGAGAGCTGTGAAGAAATGGTCTAGGCAGATTTTGGAAGGCCTTTTATATCTTCACAGTCACAATCCACCGGTTATTCACCGAGACCTTAAGTGCGATAACATTTTTGTCAATGGGAATCAAGGGGAGGTGAAAATTGGTGATTTAGGATTGGCGGCTATCCTTCAACAGGCCAATTCAGCTCACAGTGTCATAGGTACCCCTGAGTTCATGGCCCCAGAACTTTATGAAGAGGAATACAATGAGCTTGTTGACATCTATGCTTTTGGCATGTGCTTGCTAGAGTTGGTAACTGTTGAGTACCCATATATTGAATGTACCAATGCTGCTCAAATATACAAGAAAGTGACATCTGGAATAAAGCCAGCGTCATTGGCAAAGGTGGCGGATCTTGAAGTTAAAGCATTTATTGAAAAGTGTATTGCTGATGTATCGGAACGGTTGTCTGCAAAAGACCTCCTGATGGATCCCTTCCTTCAGTCAGATAATGATAATGATAGTGTAGGTCAATCTTCAAGATCTCAAACCCATCATTCAGGAAATAGTTCTCATATAGCTGTTGAGCCAAGTAGGGAATTCACGGTGGAAGGTCAGAGGAGAGATAATCATACAATATTTTTAAAATTGCGAATTGCAGATTCCTCAGGTAATATTCGCAATATCCACTTTCCTTTTGATATTGAAGCAGACACATCAATCTCTGTTGCTAGTGAAATGGTTGAGGAGTTGGAACTCACTGATCAAGATGTTACAACTATTGCTAGGATGATTGATTCTGAAATTCGATATCACATTCCTAGTTGGAATTTCAGTGAAACTCCTCTTGACATTAACCATCAAGATTCAAGCTGTACCTCTGAAACTAGGCCAGAGACCTCTCCTATGAAAAATGATTCCATTGCTTCTCCTGGCAGTCTTGCATTAGAAATATTACCTTCAGGTCGTAGGTACTGGTCAGATTCACCAAGGGGAGTTGGAGGAAACTCTCCATCTCAACATTTTACTTCAATCTTGTCTAATGAAACAGGTGTGAATGCTGAGGAAGGCAACCTGATTACAAATGGTGATATTTCAGCTAATGATTGTGTTGATGGTACTGCTGAGCGGGAATGTGATGAGATTGCTGATTCCCCTTCCAGTGAGATAAGTATTACATCGGGAGCAACTAGTGAAAAATCTTCTCAGAAAGAAATATCTCGAAGTCTAAAAGATTCTGAAACGGAATACATCAATCAAATAACAACTAAATTGGAGAATTTGTTGGTTAAACAAAGAGAGGAGTTAGATGAACTAAAGAGGAAGCACAAATTAGCTGTCTCAGATCTTTTGATGGAAATTCCTCCAGAAATGTGCCAGAAGGTCCTAAACGTATGCAACCTGCAGATGCCTGACGGTGAAATGGCGATGCTTGTCCTTCATTAA 1800 0.4094 MPPDSSELDLDDPDIEFVEVDPTGRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQVKVADLLRNSEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRKKHKHVDLRAVKKWSRQILEGLLYLHSHNPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTVEYPYIECTNAAQIYKKVTSGIKPASLAKVADLEVKAFIEKCIADVSERLSAKDLLMDPFLQSDNDNDSVGQSSRSQTHHSGNSSHIAVEPSREFTVEGQRRDNHTIFLKLRIADSSGNIRNIHFPFDIEADTSISVASEMVEELELTDQDVTTIARMIDSEIRYHIPSWNFSETPLDINHQDSSCTSETRPETSPMKNDSIASPGSLALEILPSGRRYWSDSPRGVGGNSPSQHFTSILSNETGVNAEEGNLITNGDISANDCVDGTAERECDEIADSPSSEISITSGATSEKSSQKEISRSLKDSETEYINQITTKLENLLVKQREELDELKRKHKLAVSDLLMEIPPEMCQKVLNVCNLQMPDGEMAMLVLH* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1589 599 MobiDBLite consensus disorder prediction 406 428 - -
Gso4g1589 599 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 7 589 - -
Gso4g1589 599 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1589 599 MobiDBLite consensus disorder prediction 406 426 - -
Gso4g1589 599 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 333 387 IPR024678 GO:0004674|GO:0005524
Gso4g1589 599 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Gso4g1589 599 Gene3D Transferase(Phosphotransferase) domain 1 110 293 - -
Gso4g1589 599 MobiDBLite consensus disorder prediction 504 521 - -
Gso4g1589 599 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 7 589 - -
Gso4g1589 599 MobiDBLite consensus disorder prediction 290 314 - -
Gso4g1589 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Gso4g1589 599 CDD STKc_WNK 25 285 - -
Gso4g1589 599 SUPERFAMILY Protein kinase-like (PK-like) 29 286 IPR011009 -
Gso4g1589 599 MobiDBLite consensus disorder prediction 499 523 - -
Gso4g1589 599 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1589 599 Coils Coil 540 567 - -
Gso4g1589 599 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1589 599 Gene3D - 329 417 - -
Gso4g1589 599 MobiDBLite consensus disorder prediction 290 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1589 Gso-Chr4 45522682 45527282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1589 17 394 MAP Kinase Kinase Kinase AT3G22420 55.046 4.83e-165 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gso4g1589 Pkinase 6.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1589 K08867 - gmx:100301899 1108.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1589 4 45522682 45527282 Gso6g1493 6 15029986 15034370 GST